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    LOC101927543 uncharacterized LOC101927543 [ Homo sapiens (human) ]

    Gene ID: 101927543, updated on 10-Dec-2024

    Summary

    Gene symbol
    LOC101927543
    Gene description
    uncharacterized LOC101927543
    See related
    Ensembl:ENSG00000248318
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

    See LOC101927543 in Genome Data Viewer
    Location:
    8q24.12
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 8 NC_000008.11 (120761253..120776832)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 8 NC_060932.1 (121889398..121905002)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 8 NC_000008.10 (121773493..121789072)

    Chromosome 8 - NC_000008.11Genomic Context describing neighboring genes Neighboring gene MDM2 binding protein Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr8:121567323-121568522 Neighboring gene syntrophin beta 1 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr8:121637686-121638215 Neighboring gene non-SMC condensin I complex subunit G pseudogene 1 Neighboring gene NANOG hESC enhancer GRCh37_chr8:121697522-121698069 Neighboring gene Sharpr-MPRA regulatory region 2819 Neighboring gene ReSE screen-validated silencer GRCh37_chr8:121910815-121910916 Neighboring gene Sharpr-MPRA regulatory region 15420 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27850 Neighboring gene H3K27ac hESC enhancer GRCh37_chr8:122068285-122068786 Neighboring gene VISTA enhancer hs1482 Neighboring gene glucosamine-phosphate N-acetyltransferase 1 pseudogene Neighboring gene uncharacterized LOC124902010

    Genomic regions, transcripts, and products

    Expression

    • Project title: Tissue-specific circular RNA induction during human fetal development
    • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
    • BioProject: PRJNA270632
    • Publication: PMID 26076956
    • Analysis date: Mon Apr 2 22:54:59 2018

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_125419.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AK057448
      Related
      ENST00000509350.1

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000008.11 Reference GRCh38.p14 Primary Assembly

      Range
      120761253..120776832
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060932.1 Alternate T2T-CHM13v2.0

      Range
      121889398..121905002
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)