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    ZPLD2P zona pellucida like domain containing 2, pseudogene [ Homo sapiens (human) ]

    Gene ID: 101928303, updated on 10-Dec-2024

    Summary

    Official Symbol
    ZPLD2Pprovided by HGNC
    Official Full Name
    zona pellucida like domain containing 2, pseudogeneprovided by HGNC
    Primary source
    HGNC:HGNC:54510
    See related
    Ensembl:ENSG00000293494 AllianceGenome:HGNC:54510
    Gene type
    pseudo
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Biased expression in thyroid (RPKM 4.7), kidney (RPKM 3.3) and 7 other tissues See more
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    Genomic context

    See ZPLD2P in Genome Data Viewer
    Location:
    1p36.11
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (26225320..26229840)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (26062759..26067279)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (26551811..26556331)

    Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene ARF like GTPase 16 pseudogene Neighboring gene uncharacterized LOC124903882 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:26551137-26551642 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:26551643-26552147 Neighboring gene ReSE screen-validated silencer GRCh37_chr1:26556108-26556276 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 483 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 484 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 485 Neighboring gene centrosomal protein 85 Neighboring gene uncharacterized LOC124904684 Neighboring gene MPRA-validated peak133 silencer Neighboring gene mitochondrial ribosomal protein S6 pseudogene 1

    Genomic regions, transcripts, and products

    Expression

    • Project title: Tissue-specific circular RNA induction during human fetal development
    • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
    • BioProject: PRJNA270632
    • Publication: PMID 26076956
    • Analysis date: Mon Apr 2 22:54:59 2018

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_110698.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AL355877, BC030768
      Related
      ENST00000451482.4

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

      Range
      26225320..26229840
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060925.1 Alternate T2T-CHM13v2.0

      Range
      26062759..26067279
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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