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    Gm13199 predicted gene 13199 [ Mus musculus (house mouse) ]

    Gene ID: 791411, updated on 17-Aug-2024

    Summary

    Official Symbol
    Gm13199provided by MGI
    Official Full Name
    predicted gene 13199provided by MGI
    Primary source
    MGI:MGI:3649231
    See related
    Ensembl:ENSMUSG00000056718 AllianceGenome:MGI:3649231
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Expression
    Ubiquitous expression in CNS E11.5 (RPKM 5.5), limb E14.5 (RPKM 3.4) and 28 other tissues See more
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    Genomic context

    See Gm13199 in Genome Data Viewer
    Location:
    2 A1; 2 3.62 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (5866891..5867745, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (5862080..5862934, complement)

    Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer mm9_chr2:5661717-5662018 Neighboring gene predicted gene, 29857 Neighboring gene STARR-seq mESC enhancer starr_03574 Neighboring gene STARR-seq mESC enhancer starr_03576 Neighboring gene cell division cycle 123 Neighboring gene predicted gene, 29984 Neighboring gene CapStarr-seq enhancer MGSCv37_chr2:5766095-5766344 Neighboring gene nudix hydrolase 5 Neighboring gene STARR-seq mESC enhancer starr_03579 Neighboring gene SEC61 translocon subunit alpha 2 Neighboring gene STARR-positive B cell enhancer mm9_chr2:5816293-5816594 Neighboring gene predicted gene 13267 Neighboring gene dehydrogenase E1 and transketolase domain containing 1

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_152181.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AL928924
      Related
      ENSMUST00000142918.2

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000068.8 Reference GRCm39 C57BL/6J

      Range
      5866891..5867745 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)