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    Semp2l1 SUMO/sentrin specific peptidase 2-like 1 [ Mus musculus (house mouse) ]

    Gene ID: 408191, updated on 4-Jan-2025

    Summary

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    Official Symbol
    Semp2l1provided by MGI
    Official Full Name
    SUMO/sentrin specific peptidase 2-like 1provided by MGI
    Primary source
    MGI:MGI:3644687
    See related
    Ensembl:ENSMUSG00000091318 AllianceGenome:MGI:3644687
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Gm5415; Senp14; EG408191
    Summary
    Predicted to enable deSUMOylase activity. Predicted to be involved in protein desumoylation. Predicted to be active in nucleus. [provided by Alliance of Genome Resources, Jan 2025]
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    Genomic context

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    See Semp2l1 in Genome Data Viewer
    Location:
    1 B; 1 12.43 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 1 NC_000067.7 (32582627..32586374, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 1 NC_000067.6 (32543546..32547293, complement)

    Chromosome 1 - NC_000067.7Genomic Context describing neighboring genes Neighboring gene KH domain containing, RNA binding, signal transduction associated 2 Neighboring gene 40S ribosomal protein S28 pseudogene Neighboring gene predicted gene 9839 Neighboring gene STARR-seq mESC enhancer starr_00527 Neighboring gene predicted gene, 24732 Neighboring gene STARR-seq mESC enhancer starr_00528 Neighboring gene STARR-seq mESC enhancer starr_00529 Neighboring gene STARR-seq mESC enhancer starr_00530 Neighboring gene STARR-seq mESC enhancer starr_00531 Neighboring gene SET domain containing 3 pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A genomic analysis of rat proteases and protease inhibitors. Puente XS, et al. Genome Res, 2004 Apr. PMID 15060002, Free PMC Article
    2. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
    3. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
    4. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article
    5. Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes. Carninci P, et al. Genome Res, 2000 Oct. PMID 11042159, Free PMC Article

    See all (9) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables deSUMOylase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in protein desumoylation IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    SUMO/sentrin specific peptidase 2-like 1
    Names
    SUMO/sentrin specific peptidase 2=like 1
    sentrin 14

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001164286.1 → NP_001157758.1  SUMO/sentrin specific peptidase 2-like 1

      Status: PROVISIONAL

      Source sequence(s)
      AC122027
      Consensus CDS
      CCDS48234.1
      UniProtKB/TrEMBL
      E9PXF3
      Related
      ENSMUSP00000132789.2, ENSMUST00000171322.3
      Conserved Domains (1) summary
      cl23802
      Location:231 → 473
      Peptidase_C48; Ulp1 protease family, C-terminal catalytic domain

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000067.7 Reference GRCm39 C57BL/6J

      Range
      32582627..32586374 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version

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