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    Obp56b Odorant-binding protein 56b [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 37265, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Obp56bprovided by FlyBase
    Official Full Name
    Odorant-binding protein 56bprovided by FlyBase
    Primary source
    FLYBASE:FBgn0046880
    Locus tag
    Dmel_CG30129
    See related
    AllianceGenome:FB:FBgn0046880
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    56b; CG15129; CG30129; DmelObp56b; Dmel\CG30129; OBP56b
    Summary
    Predicted to enable odorant binding activity. Predicted to be involved in sensory perception of smell. Predicted to be located in extracellular region. Is expressed in adult labral sense organ; dorsal cibarial sense organ; embryonic antennal sense organ; and embryonic maxillary sensory complex. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See Obp56b in Genome Data Viewer
    Location:
    56E2-56E2; 2-90 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (19698714..19699346, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (15586219..15586851, complement)

    Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR44506 Neighboring gene Odorant-binding protein 56a Neighboring gene Odorant-binding protein 56c Neighboring gene Odorant-binding protein 56d

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Association of polymorphisms in odorant-binding protein genes with variation in olfactory response to benzaldehyde in Drosophila. Wang P, et al. Genetics, 2007 Nov. PMID 17720903, Free PMC Article
    2. A large family of divergent Drosophila odorant-binding proteins expressed in gustatory and olfactory sensilla. Galindo K, et al. Genetics, 2001 Nov. PMID 11729153, Free PMC Article
    3. The odorant-binding proteins of Drosophila melanogaster: annotation and characterization of a divergent gene family. Graham LA, et al. Gene, 2002 Jun 12. PMID 12119098
    4. The 40-Year Mystery of Insect Odorant-Binding Proteins. Rihani K, et al. Biomolecules, 2021 Mar 30. PMID 33808208, Free PMC Article
    5. Drosophila HP1c isoform interacts with the zinc-finger proteins WOC and Relative-of-WOC to regulate gene expression. Font-Burgada J, et al. Genes Dev, 2008 Nov 1. PMID 18981478, Free PMC Article

    See all (32) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables odorant binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables odorant binding ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in sensory perception of chemical stimulus ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    involved_in sensory perception of smell IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    Odorant-binding protein 56b
    Names
    CG30129-PA
    Obp56b-PA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.4 Reference assembly

      Range
      19698714..19699346 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_137599.2 → NP_611443.1  Odorant-binding protein 56b [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_611443.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A1ZBP7, A9QHC9
      Related
      FBpp0085675
      Conserved Domains (1) summary
      smart00708
      Location:35 → 135
      PhBP; Insect pheromone/odorant binding protein domains
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A1ZBP7 A1ZBP7

    Gene LinkOut

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