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    Lhfpl7 LHFPL tetraspan subfamily member 7 [ Mus musculus (house mouse) ]

    Gene ID: 333048, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Lhfpl7provided by MGI
    Official Full Name
    LHFPL tetraspan subfamily member 7provided by MGI
    Primary source
    MGI:MGI:2685700
    See related
    Ensembl:ENSMUSG00000066964 AllianceGenome:MGI:2685700
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Gm854; Tmem211
    Summary
    Predicted to be active in membrane. Orthologous to human LHFPL7 (LHFPL tetraspan subfamily member 7). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Low expression observed in reference dataset See more
    Orthologs
    human all
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    Genomic context

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    See Lhfpl7 in Genome Data Viewer
    Location:
    5 F; 5 55.43 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (113374775..113388089)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (113226909..113240223)

    Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA 2900026A02 gene Neighboring gene RIKEN cDNA 4833439F03 gene Neighboring gene VISTA enhancer mm329 Neighboring gene predicted gene, 42161 Neighboring gene small G protein signaling modulator 1 Neighboring gene microRNA 7229

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

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    Related articles in PubMed

    1. Genetic determinants of micronucleus formation in vivo. Adams DJ, et al. Nature, 2024 Mar. PMID 38355793, Free PMC Article
    2. A conditional knockout resource for the genome-wide study of mouse gene function. Skarnes WC, et al. Nature, 2011 Jun 15. PMID 21677750, Free PMC Article
    3. A high-resolution anatomical atlas of the transcriptome in the mouse embryo. Diez-Roux G, et al. PLoS Biol, 2011 Jan 18. PMID 21267068, Free PMC Article
    4. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
    5. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636

    See all (12) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Variation

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    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Chemically induced (ENU) (1) 
    • Endonuclease-mediated (2) 
    • Targeted (2) 

    General gene information

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    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    LHFPL tetraspan subfamily member 7 protein
    Names
    transmembrane protein 211

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001033428.2 → NP_001028600.1  LHFPL tetraspan subfamily member 7 protein precursor

      See identical proteins and their annotated locations for NP_001028600.1

      Status: PROVISIONAL

      Source sequence(s)
      AK138629
      Consensus CDS
      CCDS19548.1
      UniProtKB/Swiss-Prot
      B9EJN6, Q3UUA0
      UniProtKB/TrEMBL
      B7ZWI1
      Related
      ENSMUSP00000083808.3, ENSMUST00000086615.3
      Conserved Domains (1) summary
      cl21598
      Location:19 → 166
      PMP22_Claudin; PMP-22/EMP/MP20/Claudin family

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000071.7 Reference GRCm39 C57BL/6J

      Range
      113374775..113388089
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006535021.3 → XP_006535084.1  LHFPL tetraspan subfamily member 7 protein isoform X1

      See identical proteins and their annotated locations for XP_006535084.1

      UniProtKB/Swiss-Prot
      B9EJN6, Q3UUA0
      UniProtKB/TrEMBL
      B7ZWI1
      Conserved Domains (1) summary
      cl21598
      Location:19 → 166
      PMP22_Claudin; PMP-22/EMP/MP20/Claudin family
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q3UUA0.1 GenPept UniProtKB/Swiss-Prot:Q3UUA0

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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