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    Gm11872 predicted gene 11872 [ Mus musculus (house mouse) ]

    Gene ID: 102632436, updated on 17-Aug-2024

    Summary

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    Official Symbol
    Gm11872provided by MGI
    Official Full Name
    predicted gene 11872provided by MGI
    Primary source
    MGI:MGI:3649333
    See related
    AllianceGenome:MGI:3649333
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
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    Genomic context

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    See Gm11872 in Genome Data Viewer
    Location:
    4 A3; 4 8.12 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (20342918..20349449)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (20342918..20349449)

    Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene small cell adhesion glycoprotein pseudogene Neighboring gene STARR-seq mESC enhancer starr_09708 Neighboring gene Na+/K+ transporting ATPase interacting 3 Neighboring gene STARR-positive B cell enhancer mm9_chr4:20118894-20119195 Neighboring gene STARR-seq mESC enhancer starr_09709 Neighboring gene predicted gene, 52761 Neighboring gene STARR-seq mESC enhancer starr_09710 Neighboring gene tubulin, alpha 4A pseudogene Neighboring gene STARR-seq mESC enhancer starr_09711 Neighboring gene STARR-seq mESC enhancer starr_09712 Neighboring gene STARR-seq mESC enhancer starr_09713 Neighboring gene STARR-seq mESC enhancer starr_09714 Neighboring gene STARR-seq mESC enhancer starr_09715 Neighboring gene STARR-seq mESC enhancer starr_09716 Neighboring gene STARR-seq mESC enhancer starr_09718 Neighboring gene core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1 pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The Vertebrate Genome Annotation browser 10 years on. Harrow JL, et al. Nucleic Acids Res, 2014 Jan. PMID 24316575, Free PMC Article
    2. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
    3. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
    4. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article
    5. Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes. Carninci P, et al. Genome Res, 2000 Oct. PMID 11042159, Free PMC Article

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000070.7 Reference GRCm39 C57BL/6J

      Range
      20342918..20349449
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_003955372.1 RNA Sequence

    2. XR_003955373.1 RNA Sequence

    Nucleotide Protein Strain
    Heading Accession and Version

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