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    Dmap1 DNA methyltransferase 1-associated protein 1 [ Mus musculus (house mouse) ]

    Gene ID: 66233, updated on 9-Dec-2024

    Summary

    Official Symbol
    Dmap1provided by MGI
    Official Full Name
    DNA methyltransferase 1-associated protein 1provided by MGI
    Primary source
    MGI:MGI:1913483
    See related
    Ensembl:ENSMUSG00000009640 AllianceGenome:MGI:1913483
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    DNMAP1; Dmtap1; DNMTAP1; mKIAA1425; 1500016M21Rik
    Summary
    Enables transcription corepressor activity. Acts upstream of or within negative regulation of transcription by RNA polymerase II. Located in replication fork. Is expressed in several structures, including alimentary system; brain; genitourinary system; hemolymphoid system; and integumental system. Orthologous to human DMAP1 (DNA methyltransferase 1 associated protein 1). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Ubiquitous expression in CNS E11.5 (RPKM 19.7), CNS E14 (RPKM 18.3) and 28 other tissues See more
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    See Dmap1 in Genome Data Viewer
    Location:
    4 D1; 4 53.46 cM
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (117531878..117539450, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (117674681..117682321, complement)

    Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 34669 Neighboring gene STARR-positive B cell enhancer mm9_chr4:117222596-117222897 Neighboring gene exoribonuclease 3 Neighboring gene STARR-seq mESC enhancer starr_11185 Neighboring gene STARR-seq mESC enhancer starr_11187 Neighboring gene zinc finger (CCCH type), RNA binding motif and serine/arginine rich 2 pseudogene Neighboring gene CapStarr-seq enhancer MGSCv37_chr4:117354782-117355011 Neighboring gene predicted gene, 34746 Neighboring gene Kruppel-like transcription factor 18

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables RNA polymerase II-specific DNA-binding transcription factor binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables RNA polymerase II-specific DNA-binding transcription factor binding ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables transcription corepressor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables transcription corepressor activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in DNA repair IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in chromatin remodeling IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in negative regulation of transcription by RNA polymerase II IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of_or_within negative regulation of transcription by RNA polymerase II IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in negative regulation of transcription by RNA polymerase II ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in negative regulation of transcription by RNA polymerase II ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in positive regulation of DNA-templated transcription NAS
    Non-traceable Author Statement
    more info
    PubMed 
    involved_in positive regulation of double-strand break repair via homologous recombination ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of protein import into nucleus ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of protein import into nucleus ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in regulation of DNA-templated transcription NAS
    Non-traceable Author Statement
    more info
    PubMed 
    involved_in regulation of apoptotic process NAS
    Non-traceable Author Statement
    more info
    PubMed 
    involved_in regulation of cell cycle ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in regulation of double-strand break repair NAS
    Non-traceable Author Statement
    more info
    PubMed 
    involved_in response to ethanol IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    part_of NuA4 histone acetyltransferase complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of NuA4 histone acetyltransferase complex ISO
    Inferred from Sequence Orthology
    more info
     
    part_of NuA4 histone acetyltransferase complex ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    part_of Swr1 complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in cytoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    located_in cytoplasm ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
     
    located_in cytosol ISO
    Inferred from Sequence Orthology
    more info
     
    located_in nucleoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    located_in nucleoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    part_of nucleosome ISO
    Inferred from Sequence Orthology
    more info
     
    part_of nucleosome NAS
    Non-traceable Author Statement
    more info
    PubMed 
    located_in nucleus ISO
    Inferred from Sequence Orthology
    more info
     
    located_in nucleus ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    located_in replication fork IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    DNA methyltransferase 1-associated protein 1
    Names
    DNMT1 associated protein-1
    MAT1-mediated transcriptional repressor

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001419061.1NP_001405990.1  DNA methyltransferase 1-associated protein 1

      Status: VALIDATED

      Source sequence(s)
      AL671520
      UniProtKB/Swiss-Prot
      Q99LM0, Q9CSS9, Q9DB33, Q9JI44
    2. NM_001419062.1NP_001405991.1  DNA methyltransferase 1-associated protein 1

      Status: VALIDATED

      Source sequence(s)
      AL671520
      UniProtKB/Swiss-Prot
      Q99LM0, Q9CSS9, Q9DB33, Q9JI44
    3. NM_001419063.1NP_001405992.1  DNA methyltransferase 1-associated protein 1

      Status: VALIDATED

      Source sequence(s)
      AL671520
      UniProtKB/Swiss-Prot
      Q99LM0, Q9CSS9, Q9DB33, Q9JI44
      Related
      ENSMUST00000135582.8
    4. NM_023178.3NP_075667.1  DNA methyltransferase 1-associated protein 1

      See identical proteins and their annotated locations for NP_075667.1

      Status: VALIDATED

      Source sequence(s)
      AL671520
      Consensus CDS
      CCDS18536.1
      UniProtKB/Swiss-Prot
      Q99LM0, Q9CSS9, Q9DB33, Q9JI44
      Related
      ENSMUSP00000099748.4, ENSMUST00000102687.4
      Conserved Domains (2) summary
      pfam05499
      Location:243400
      DMAP1; DNA methyltransferase 1-associated protein 1 (DMAP1)
      pfam16282
      Location:124203
      SANT_DAMP1_like; SANT/Myb-like domain of DAMP1

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000070.7 Reference GRCm39 C57BL/6J

      Range
      117531878..117539450 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)