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    Vmn1r226 vomeronasal 1 receptor 226 [ Mus musculus (house mouse) ]

    Gene ID: 171225, updated on 9-Dec-2024

    Summary

    Official Symbol
    Vmn1r226provided by MGI
    Official Full Name
    vomeronasal 1 receptor 226provided by MGI
    Primary source
    MGI:MGI:2159616
    See related
    Ensembl:ENSMUSG00000042848 AllianceGenome:MGI:2159616
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    V1re2
    Summary
    Predicted to enable pheromone binding activity and pheromone receptor activity. Predicted to act upstream of or within response to pheromone. Predicted to be located in plasma membrane. Orthologous to human VN1R2 (vomeronasal 1 receptor 2). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

    See Vmn1r226 in Genome Data Viewer
    Location:
    17 A3.2; 17 11.4 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 17 NC_000083.7 (20907770..20908666)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 17 NC_000083.6 (20687508..20688404)

    Chromosome 17 - NC_000083.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 52311 Neighboring gene actin related protein 2/3 complex, subunit 2 pseudogene Neighboring gene STARR-seq mESC enhancer starr_41999 Neighboring gene STARR-seq mESC enhancer starr_42000 Neighboring gene vomeronasal 1 receptor 227 Neighboring gene vomeronasal 1 receptor 228

    Genomic regions, transcripts, and products

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (2) 

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables pheromone binding ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    enables pheromone receptor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within response to pheromone ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 

    General protein information

    Preferred Names
    vomeronasal 1 receptor 226
    Names
    vomernasal 1 receptor Vmn1r226
    vomeronasal 1 receptor, E2
    vomeronasal type 1 receptor E2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_134191.1NP_598952.1  vomeronasal 1 receptor 226

      See identical proteins and their annotated locations for NP_598952.1

      Status: PROVISIONAL

      Source sequence(s)
      AY065502
      Consensus CDS
      CCDS28426.1
      UniProtKB/TrEMBL
      F6MBB1, F6MBB5, F6MBC3, Q0VDY9, Q8R2A8
      Related
      ENSMUSP00000058266.4, ENSMUST00000061756.4
      Conserved Domains (1) summary
      pfam03402
      Location:37285
      V1R; Vomeronasal organ pheromone receptor family, V1R

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000083.7 Reference GRCm39 C57BL/6J

      Range
      20907770..20908666
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)