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    Snf1 kinase interactor-like protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 844434, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Snf1 kinase interactor-like protein
    Primary source
    TAIR:AT1G80940
    Locus tag
    AT1G80940
    See related
    Araport:AT1G80940
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F23A5.30; F23A5_30
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    3
    Sequence:
    Chromosome: 1; NC_003070.9 (30410585..30412289)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene vacuolar fusion CCZ1-like protein (DUF1712) Neighboring gene MIF4G domain-containing protein / MA3 domain-containing protein Neighboring gene Chaperone DnaJ-domain superfamily protein Neighboring gene Phospholipid/glycerol acyltransferase family protein Neighboring gene F-box and Leucine Rich Repeat domains containing protein Neighboring gene ncRNA Neighboring gene XH domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Extensive signal integration by the phytohormone protein network. Altmann M, et al. Nature, 2020 Jul. PMID 32612234
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_001335021.1
    NM_001335022.1
    NM_106742.5
    NM_202464.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of flower development IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Snf1 kinase interactor-like protein
    NP_565248.1
    • unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    NP_974193.1
    • unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      30410585..30412289
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_106742.5 → NP_565248.1  Snf1 kinase interactor-like protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_565248.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W3D1, A0A5S9WWG2, A0A7G2E4K0, Q9SAG6

    2. NM_001335021.1 → NP_001322935.1  Snf1 kinase interactor-like protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AVK8

    3. NM_202464.3 → NP_974193.1  Snf1 kinase interactor-like protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_974193.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      F4HVT3

    4. NM_001335022.1 → NP_001322936.1  Snf1 kinase interactor-like protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AVJ1
    Nucleotide Protein
    Heading Accession and Version

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