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    Igkv5-43 immunoglobulin kappa chain variable 5-43 [ Mus musculus (house mouse) ]

    Gene ID: 381783, updated on 9-Dec-2024

    Summary

    Official Symbol
    Igkv5-43provided by MGI
    Official Full Name
    immunoglobulin kappa chain variable 5-43provided by MGI
    Primary source
    MGI:MGI:4943320
    See related
    Ensembl:ENSMUSG00000094433 IMGT/GENE-DB:IGKV5-43; AllianceGenome:MGI:4943320
    Gene type
    other
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Igk-V23; Igkv5-45
    Summary
    Predicted to be involved in immune response. Predicted to be part of immunoglobulin complex. Orthologous to human IGKV6-21 (immunoglobulin kappa variable 6-21 (non-functional)); IGKV6D-21 (immunoglobulin kappa variable 6D-21 (non-functional)); and IGKV6D-41 (immunoglobulin kappa variable 6D-41 (non-functional)). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

    See Igkv5-43 in Genome Data Viewer
    Location:
    6 C1; 6 31.63 cM
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 6 NC_000072.7 (69800339..69800895, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 6 NC_000072.6 (69823355..69823911, complement)

    Chromosome 6 - NC_000072.7Genomic Context describing neighboring genes Neighboring gene immunoglobulin kappa chain complex Neighboring gene immunoglobulin kappa chain variable 5-45 Neighboring gene immunoglobulin kappa variable 12-44 Neighboring gene immunoglobulin kappa chain variable 12-42 Neighboring gene immunoglobulin kappa chain variable 12-41

    Genomic regions, transcripts, and products

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Other Names

    • Ig kappa-chain V-region
    • Vk23 Ig variable region
    • immunoglobulin kappa chain variable 23 (V23)
    • immunoglobulin kappa light chain variable region Vk23

    Gene Ontology Provided by MGI

    Process Evidence Code Pubs
    involved_in immune response IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    part_of immunoglobulin complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_005612.1 

      Range
      2268375..2268931 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000072.7 Reference GRCm39 C57BL/6J

      Range
      69800339..69800895 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)