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    A330070K13Rik RIKEN cDNA A330070K13 gene [ Mus musculus (house mouse) ]

    Gene ID: 381673, updated on 27-Nov-2024

    Summary

    Official Symbol
    A330070K13Rikprovided by MGI
    Official Full Name
    RIKEN cDNA A330070K13 geneprovided by MGI
    Primary source
    MGI:MGI:2685897
    See related
    Ensembl:ENSMUSG00000052014 AllianceGenome:MGI:2685897
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Gm1051
    Expression
    Biased expression in testis adult (RPKM 1.3), cerebellum adult (RPKM 0.9) and 3 other tissues See more
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    Genomic context

    See A330070K13Rik in Genome Data Viewer
    Location:
    5 G1.3; 5 69.33 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (130407692..130413472, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (130378851..130384631, complement)

    Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer ABC_E234 Neighboring gene STARR-positive B cell enhancer ABC_E279 Neighboring gene STARR-seq mESC enhancer starr_14473 Neighboring gene STARR-seq mESC enhancer starr_14474 Neighboring gene tRNA-yW synthesizing protein 1 homolog (S. cerevisiae) Neighboring gene STARR-seq mESC enhancer starr_14475 Neighboring gene STARR-seq mESC enhancer starr_14476 Neighboring gene predicted gene, 40336 Neighboring gene calneuron 1 Neighboring gene STARR-seq mESC enhancer starr_14477 Neighboring gene STARR-seq mESC enhancer starr_14478 Neighboring gene predicted gene, 40337 Neighboring gene polypeptide N-acetylgalactosaminyltransferase 17 Neighboring gene STARR-seq mESC enhancer starr_14479 Neighboring gene predicted gene, 40338

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    General protein information

    Preferred Names
    uncharacterized protein LOC381673

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_198665.2NP_941067.1  uncharacterized protein LOC381673

      See identical proteins and their annotated locations for NP_941067.1

      Status: VALIDATED

      Source sequence(s)
      AC113029
      Consensus CDS
      CCDS57385.1
      UniProtKB/TrEMBL
      Q8CA53
      Related
      ENSMUST00000200886.3

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000071.7 Reference GRCm39 C57BL/6J

      Range
      130407692..130413472 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)