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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001350145.3 → NP_001337074.2 inaD-like protein isoform 2
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) includes an alternate penultimate exon, compared to variant 1, resulting in a novel 3' coding region and shorter 3' UTR. It encodes isoform 2 which has a longer and distinct C-terminus, compared to isoform 1.
- Source sequence(s)
-
AC097064, AL136458, AL353802, AL449143, AL590374
- Consensus CDS
-
CCDS85980.1
- UniProtKB/TrEMBL
-
A0A2R8Y549
- Related
- ENSP00000494277.1, ENST00000642238.2
- Conserved Domains (4) summary
-
- smart00228
Location:1434 → 1519
- PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
- COG0793
Location:391 → 513
- CtpA; C-terminal processing protease CtpA/Prc, contains a PDZ domain [Posttranslational modification, protein turnover, chaperones]
- cd00992
Location:1797 → 1881
- PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
- pfam09045
Location:8 → 65
- L27_2
-
NM_176877.5 → NP_795352.3 inaD-like protein isoform 1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents the shorter transcript and encodes the shorter isoform (1).
- Source sequence(s)
-
AC097064, AL136458, AL353802, AL449143, AL590374
- Consensus CDS
-
CCDS617.2
- UniProtKB/Swiss-Prot
- O15249, O43742, O60833, Q5VUA5, Q5VUA6, Q5VUA7, Q5VUA8, Q5VUA9, Q5VUB0, Q8NI35, Q8WU78, Q9H3N9
- Related
- ENSP00000360200.2, ENST00000371158.6
- Conserved Domains (4) summary
-
- smart00228
Location:1434 → 1519
- PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
- COG0793
Location:391 → 513
- CtpA; C-terminal processing protease CtpA/Prc, contains a PDZ domain [Posttranslational modification, protein turnover, chaperones]
- cd00992
Location:1674 → 1759
- PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
- pfam09045
Location:8 → 65
- L27_2
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000001.11 Reference GRCh38.p14 Primary Assembly
- Range
-
61742480..62163915
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_011540462.4 → XP_011538764.1 inaD-like protein isoform X1
See identical proteins and their annotated locations for XP_011538764.1
- Conserved Domains (3) summary
-
- pfam09045
Location:8 → 65
- L27_2; L27_2
- smart00228
Location:1236 → 1321
- PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
- cd00992
Location:1852 → 1936
- PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
-
XM_011540467.4 → XP_011538769.1 inaD-like protein isoform X7
- Conserved Domains (3) summary
-
- pfam09045
Location:8 → 65
- L27_2; L27_2
- smart00228
Location:1236 → 1321
- PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
- cd00992
Location:1729 → 1814
- PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
-
XM_011540464.4 → XP_011538766.1 inaD-like protein isoform X2
- Conserved Domains (3) summary
-
- pfam09045
Location:8 → 65
- L27_2; L27_2
- smart00228
Location:1459 → 1558
- PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
- cd00992
Location:1836 → 1920
- PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
-
XM_011540466.4 → XP_011538768.1 inaD-like protein isoform X4
- Conserved Domains (3) summary
-
- pfam09045
Location:8 → 65
- L27_2; L27_2
- smart00228
Location:1459 → 1544
- PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
- cd00992
Location:1822 → 1906
- PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
-
XM_047424287.1 → XP_047280243.1 inaD-like protein isoform X10
-
XM_016999998.3 → XP_016855487.1 inaD-like protein isoform X6
-
XM_024448642.2 → XP_024304410.1 inaD-like protein isoform X12
- Conserved Domains (4) summary
-
- smart00228
Location:1236 → 1321
- PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
- cd00992
Location:1671 → 1756
- PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
- pfam09045
Location:8 → 65
- L27_2
- cl02526
Location:391 → 513
- Peptidase_S41; C-terminal processing peptidase family S41
-
XM_011540465.4 → XP_011538767.1 inaD-like protein isoform X3
- Conserved Domains (3) summary
-
- pfam09045
Location:8 → 65
- L27_2; L27_2
- smart00228
Location:1236 → 1321
- PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
- cd00992
Location:1827 → 1911
- PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
-
XM_047424283.1 → XP_047280239.1 inaD-like protein isoform X9
-
XM_024448614.2 → XP_024304382.1 inaD-like protein isoform X5
- Conserved Domains (4) summary
-
- smart00228
Location:1434 → 1533
- PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
- cd00992
Location:1811 → 1895
- PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
- pfam09045
Location:8 → 65
- L27_2
- cl02526
Location:391 → 513
- Peptidase_S41; C-terminal processing peptidase family S41
-
XM_047424301.1 → XP_047280257.1 inaD-like protein isoform X11
-
XM_016999999.3 → XP_016855488.1 inaD-like protein isoform X8
-
XM_011540468.4 → XP_011538770.1 inaD-like protein isoform X14
- Conserved Domains (3) summary
-
- pfam09045
Location:8 → 65
- L27_2; L27_2
- smart00228
Location:1236 → 1321
- PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
- cd00992
Location:246 → 325
- PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
-
XM_047424321.1 → XP_047280277.1 inaD-like protein isoform X15
- Related
-
ENST00000635214.1
-
XM_011540469.4 → XP_011538771.1 inaD-like protein isoform X16
- UniProtKB/TrEMBL
-
A5PKX9
- Conserved Domains (3) summary
-
- pfam09045
Location:8 → 65
- L27_2; L27_2
- smart00228
Location:683 → 772
- PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
- cd00992
Location:246 → 325
- PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
-
XM_006710278.5 → XP_006710341.1 inaD-like protein isoform X18
- UniProtKB/TrEMBL
-
A5PKX9
- Conserved Domains (3) summary
-
- pfam09045
Location:8 → 65
- L27_2; L27_2
- smart00228
Location:683 → 772
- PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
- cd00992
Location:246 → 325
- PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
-
XM_005270347.3 → XP_005270404.1 inaD-like protein isoform X17
- UniProtKB/TrEMBL
-
A5PKX9
- Conserved Domains (3) summary
-
- pfam09045
Location:8 → 65
- L27_2; L27_2
- smart00228
Location:683 → 772
- PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
- cd00992
Location:246 → 325
- PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
-
XM_011540470.3 → XP_011538772.1 inaD-like protein isoform X20
- UniProtKB/TrEMBL
-
A5PKX9
- Conserved Domains (3) summary
-
- pfam09045
Location:8 → 65
- L27_2; L27_2
- smart00228
Location:683 → 772
- PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
- cd00992
Location:246 → 325
- PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
-
XM_011540463.3 → XP_011538765.1 inaD-like protein isoform X1
See identical proteins and their annotated locations for XP_011538765.1
- Conserved Domains (3) summary
-
- pfam09045
Location:8 → 65
- L27_2; L27_2
- smart00228
Location:1236 → 1321
- PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
- cd00992
Location:1852 → 1936
- PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
-
XM_017000000.2 → XP_016855489.1 inaD-like protein isoform X13
-
XM_017000001.2 → XP_016855490.1 inaD-like protein isoform X19
RNA
-
XR_007061928.1 RNA Sequence
Alternate T2T-CHM13v2.0
Genomic
-
NC_060925.1 Alternate T2T-CHM13v2.0
- Range
-
61621342..62042561
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054333733.1 → XP_054189708.1 inaD-like protein isoform X1
-
XM_054333740.1 → XP_054189715.1 inaD-like protein isoform X7
-
XM_054333735.1 → XP_054189710.1 inaD-like protein isoform X2
-
XM_054333737.1 → XP_054189712.1 inaD-like protein isoform X4
-
XM_054333743.1 → XP_054189718.1 inaD-like protein isoform X10
-
XM_054333739.1 → XP_054189714.1 inaD-like protein isoform X6
-
XM_054333745.1 → XP_054189720.1 inaD-like protein isoform X12
-
XM_054333736.1 → XP_054189711.1 inaD-like protein isoform X3
-
XM_054333742.1 → XP_054189717.1 inaD-like protein isoform X9
-
XM_054333738.1 → XP_054189713.1 inaD-like protein isoform X5
-
XM_054333744.1 → XP_054189719.1 inaD-like protein isoform X11
-
XM_054333741.1 → XP_054189716.1 inaD-like protein isoform X8
-
XM_054333747.1 → XP_054189722.1 inaD-like protein isoform X14
-
XM_054333748.1 → XP_054189723.1 inaD-like protein isoform X15
-
XM_054333749.1 → XP_054189724.1 inaD-like protein isoform X16
- UniProtKB/TrEMBL
-
A5PKX9
-
XM_054333751.1 → XP_054189726.1 inaD-like protein isoform X18
- UniProtKB/TrEMBL
-
A5PKX9
-
XM_054333750.1 → XP_054189725.1 inaD-like protein isoform X17
- UniProtKB/TrEMBL
-
A5PKX9
-
XM_054333753.1 → XP_054189728.1 inaD-like protein isoform X20
- UniProtKB/TrEMBL
-
A5PKX9
-
XM_054333734.1 → XP_054189709.1 inaD-like protein isoform X1
-
XM_054333746.1 → XP_054189721.1 inaD-like protein isoform X13
-
XM_054333752.1 → XP_054189727.1 inaD-like protein isoform X19
RNA
-
XR_008485862.1 RNA Sequence
The following Reference Sequences have been suppressed. Explain
These RefSeqs were suppressed for the
cited reason(s). Suppressed RefSeqs do not appear in BLAST databases, related
sequence links, or BLAST links (BLink), but may still be retrieved by clicking on
their accession.version below.
-
NM_005799.2: Suppressed sequence
- Description
- NM_005799.2: This RefSeq was permanently suppressed because currently there is insufficient support for the transcript and the protein.
-
NM_176878.1: Suppressed sequence
- Description
- NM_176878.1: This RefSeq was permanently suppressed because currently there is insufficient support for the transcript and the protein.