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    Magea1 MAGE family member A1 [ Mus musculus (house mouse) ]

    Gene ID: 17137, updated on 27-Nov-2024

    Summary

    Official Symbol
    Magea1provided by MGI
    Official Full Name
    MAGE family member A1provided by MGI
    Primary source
    MGI:MGI:1333834
    See related
    Ensembl:ENSMUSG00000096644 AllianceGenome:MGI:1333834
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Mage-a1
    Summary
    Predicted to be involved in negative regulation of transcription by RNA polymerase II. Predicted to be located in cytosol and nucleoplasm. Predicted to be active in nucleus. Orthologous to several human genes including MAGEA10 (MAGE family member A10). [provided by Alliance of Genome Resources, Nov 2024]
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    Genomic context

    See Magea1 in Genome Data Viewer
    Location:
    X F3; X 72.38 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) X NC_000086.8 (153871515..153872786, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) X NC_000086.7 (155088519..155089790, complement)

    Chromosome X - NC_000086.8Genomic Context describing neighboring genes Neighboring gene predicted gene, 24268 Neighboring gene MAGE family member A5 Neighboring gene claudin 34B2 Neighboring gene predicted gene, 25429 Neighboring gene predicted gene 4997

    Genomic regions, transcripts, and products

    Bibliography

    Pathways from PubChem

    General gene information

    Markers

    Clone Names

    • MGC151281

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in negative regulation of transcription by RNA polymerase II IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    located_in cytosol ISO
    Inferred from Sequence Orthology
    more info
     
    located_in nucleoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    melanoma antigen family A, 1
    Names
    melanoma antigen, family A, 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_020015.2NP_064399.1  melanoma antigen family A, 1

      See identical proteins and their annotated locations for NP_064399.1

      Status: VALIDATED

      Source sequence(s)
      BC116904, CJ223782
      Consensus CDS
      CCDS30493.1
      UniProtKB/TrEMBL
      O89006, O89007
      Related
      ENSMUSP00000077323.5, ENSMUST00000078193.5
      Conserved Domains (2) summary
      pfam01454
      Location:134271
      MAGE; MAGE family
      pfam12440
      Location:4678
      MAGE_N; Melanoma associated antigen family N terminal

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000086.8 Reference GRCm39 C57BL/6J

      Range
      153871515..153872786 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)