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    Vmn1r178 vomeronasal 1 receptor 178 [ Mus musculus (house mouse) ]

    Gene ID: 232959, updated on 27-Nov-2024

    Summary

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    Official Symbol
    Vmn1r178provided by MGI
    Official Full Name
    vomeronasal 1 receptor 178provided by MGI
    Primary source
    MGI:MGI:3033482
    See related
    Ensembl:ENSMUSG00000062598 AllianceGenome:MGI:3033482
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Gm473; V1rd13
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    Genomic context

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    See Vmn1r178 in Genome Data Viewer
    Location:
    7 A3; 7 10.26 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (23592954..23593868)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (23893529..23894443)

    Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene vomeronasal 1 receptor 177 Neighboring gene zinc finger protein 787 pseudogene Neighboring gene STARR-seq mESC enhancer starr_18246 Neighboring gene STARR-seq mESC enhancer starr_18247 Neighboring gene vomeronasal 1 receptor 179 Neighboring gene ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C2 (subunit 9) pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A novel family of candidate pheromone receptors in mammals. Pantages E, et al. Neuron, 2000 Dec. PMID 11163270
    2. Multiple new and isolated families within the mouse superfamily of V1r vomeronasal receptors. Rodriguez I, et al. Nat Neurosci, 2002 Feb. PMID 11802169
    3. Manual annotation and analysis of the defensin gene cluster in the C57BL/6J mouse reference genome. Amid C, et al. BMC Genomics, 2009 Dec 15. PMID 20003482, Free PMC Article
    4. Extreme variability among mammalian V1R gene families. Young JM, et al. Genome Res, 2010 Jan. PMID 19952141, Free PMC Article
    5. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    vomeronasal 1 receptor 178
    Names
    vomernasal 1 receptor Vmn1r178
    vomeronasal 1 receptor, D13
    vomeronasal receptor V1RD13
    vomeronasal type 1 receptor D13

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_206868.2 → NP_996751.1  vomeronasal 1 receptor 178

      See identical proteins and their annotated locations for NP_996751.1

      Status: VALIDATED

      Source sequence(s)
      AC116686
      Consensus CDS
      CCDS20935.1
      UniProtKB/TrEMBL
      D3Z247, F6MB57, F6MB63, F6MB73, Q8R2B6
      Related
      ENSMUSP00000077666.3, ENSMUST00000078593.3
      Conserved Domains (1) summary
      pfam03402
      Location:42 → 290
      V1R; Vomeronasal organ pheromone receptor family, V1R

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000073.7 Reference GRCm39 C57BL/6J

      Range
      23592954..23593868
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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