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    Ptgir prostaglandin I receptor (IP) [ Mus musculus (house mouse) ]

    Gene ID: 19222, updated on 27-Nov-2024

    Summary

    Official Symbol
    Ptgirprovided by MGI
    Official Full Name
    prostaglandin I receptor (IP)provided by MGI
    Primary source
    MGI:MGI:99535
    See related
    Ensembl:ENSMUSG00000043017 AllianceGenome:MGI:99535
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    IP; PGI2
    Summary
    Predicted to enable prostacyclin receptor activity. Involved in adenylate cyclase-activating G protein-coupled receptor signaling pathway; negative regulation of platelet-derived growth factor receptor signaling pathway; and negative regulation of smooth muscle cell proliferation. Acts upstream of or within response to lipopolysaccharide. Predicted to be located in cytosol. Predicted to be active in plasma membrane. Is expressed in several structures, including alimentary system; gallbladder; genitourinary system; hemolymphoid system gland; and limb segment. Orthologous to human PTGIR (prostaglandin I2 receptor). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Broad expression in mammary gland adult (RPKM 4.9), spleen adult (RPKM 4.5) and 19 other tissues See more
    Orthologs
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    Genomic context

    See Ptgir in Genome Data Viewer
    Location:
    7 A2; 7 9.15 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (16640442..16644828)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (16906490..16910905)

    Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene dishevelled-binding antagonist of beta-catenin 3 Neighboring gene guanine nucleotide binding protein (G protein), gamma 8 Neighboring gene calmodulin 3 Neighboring gene CapStarr-seq enhancer MGSCv37_chr7:17509453-17509640 Neighboring gene predicted gene, 45972 Neighboring gene predicted gene, 32630

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (4) 
    • Targeted (1)  1 citation

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables G protein-coupled receptor activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables prostacyclin receptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
     
    located_in cytosol ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in plasma membrane ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    prostacyclin receptor
    Names
    PGI receptor
    PGI2 receptor
    prostaglandin I2 receptor
    prostanoid IP receptor

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001417172.1NP_001404101.1  prostacyclin receptor isoform 2

      Status: VALIDATED

      Source sequence(s)
      AC148981
      UniProtKB/TrEMBL
      E9PY53
      Related
      ENSMUSP00000083270.6, ENSMUST00000086101.6
    2. NM_008967.4NP_032993.2  prostacyclin receptor isoform 1

      See identical proteins and their annotated locations for NP_032993.2

      Status: VALIDATED

      Source sequence(s)
      AC148981
      Consensus CDS
      CCDS20857.2
      UniProtKB/Swiss-Prot
      P43252, Q52KE5
      UniProtKB/TrEMBL
      Q3U4F1
      Related
      ENSMUSP00000122080.2, ENSMUST00000144408.2
      Conserved Domains (2) summary
      pfam00001
      Location:58318
      7tm_1; 7 transmembrane receptor (rhodopsin family)
      cl21561
      Location:55246
      7tm_4; Olfactory receptor

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000073.7 Reference GRCm39 C57BL/6J

      Range
      16640442..16644828
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)