U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Or5w16 olfactory receptor family 5 subfamily W member 16 [ Mus musculus (house mouse) ]

    Gene ID: 258635, updated on 27-Nov-2024

    Summary

    Official Symbol
    Or5w16provided by MGI
    Official Full Name
    olfactory receptor family 5 subfamily W member 16provided by MGI
    Primary source
    MGI:MGI:3030974
    See related
    Ensembl:ENSMUSG00000068817 AllianceGenome:MGI:3030974
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    MOR177-6; Olfr1140
    Summary
    Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. [provided by RefSeq, Jul 2008]
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Or5w16 in Genome Data Viewer
    Location:
    2 D; 2 49.93 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (87576505..87577524)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (87746161..87747180)

    Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene olfactory receptor family 5 subfamily W member 15 Neighboring gene olfactory receptor 1139, pseudogene 1 Neighboring gene olfactory receptor family 5 subfamily W member 17 Neighboring gene olfactory receptor family 5 subfamily I member 1

    Genomic regions, transcripts, and products

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables odorant binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables olfactory receptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables olfactory receptor activity ISA
    Inferred from Sequence Alignment
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in membrane ISA
    Inferred from Sequence Alignment
    more info
    PubMed 

    General protein information

    Preferred Names
    olfactory receptor 1140
    Names
    GA_x6K02T2Q125-49250025-49250960
    olfactory receptor MOR177-6

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_146642.2NP_666853.2  olfactory receptor 1140

      See identical proteins and their annotated locations for NP_666853.2

      Status: VALIDATED

      Source sequence(s)
      BC120610
      Consensus CDS
      CCDS16306.1
      UniProtKB/TrEMBL
      Q7TR39, Q8VFR2
      Related
      ENSMUSP00000149645.2, ENSMUST00000217572.2
      Conserved Domains (2) summary
      pfam00001
      Location:42290
      7tm_1; 7 transmembrane receptor (rhodopsin family)
      cl21561
      Location:31304
      7tm_4; Olfactory receptor

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000068.8 Reference GRCm39 C57BL/6J

      Range
      87576505..87577524
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)