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    Spata31e2 spermatogenesis associated 31 subfamily E member 2 [ Mus musculus (house mouse) ]

    Gene ID: 210940, updated on 27-Nov-2024

    Summary

    Official Symbol
    Spata31e2provided by MGI
    Official Full Name
    spermatogenesis associated 31 subfamily E member 2provided by MGI
    Primary source
    MGI:MGI:3588222
    See related
    Ensembl:ENSMUSG00000073722 AllianceGenome:MGI:3588222
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    4931408C20Rik
    Expression
    Restricted expression toward testis adult (RPKM 2.9) See more
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    Genomic context

    See Spata31e2 in Genome Data Viewer
    Location:
    1 A5; 1 10.98 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 1 NC_000067.7 (26720882..26726541, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 1 NC_000067.6 (26681801..26687460, complement)

    Chromosome 1 - NC_000067.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 19123 Neighboring gene STARR-seq mESC enhancer starr_00472 Neighboring gene predicted gene, 24064 Neighboring gene STARR-seq mESC enhancer starr_00473 Neighboring gene predicted gene, 31136 Neighboring gene STARR-seq mESC enhancer starr_00474 Neighboring gene STARR-seq mESC enhancer starr_00476 Neighboring gene STARR-seq mESC enhancer starr_00477 Neighboring gene nuclear encoded rRNA 5S 209 Neighboring gene STARR-seq mESC enhancer starr_00478 Neighboring gene STARR-seq mESC enhancer starr_00479 Neighboring gene STARR-seq mESC enhancer starr_00480 Neighboring gene STARR-seq mESC enhancer starr_00481 Neighboring gene STARR-seq mESC enhancer starr_00482 Neighboring gene STARR-seq mESC enhancer starr_00483 Neighboring gene STARR-seq mESC enhancer starr_00484 Neighboring gene olfactory receptor 1135 pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    General protein information

    Preferred Names
    uncharacterized protein LOC210940

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001033764.3NP_001028936.2  uncharacterized protein LOC210940

      Status: VALIDATED

      Source sequence(s)
      AC102385, AK133164, BX634840
      Consensus CDS
      CCDS14856.1
      UniProtKB/TrEMBL
      E9PWP9, Q3V0G6
      Related
      ENSMUSP00000095410.4, ENSMUST00000097801.4
      Conserved Domains (1) summary
      pfam14650
      Location:128381
      FAM75; FAM75 family

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000067.7 Reference GRCm39 C57BL/6J

      Range
      26720882..26726541 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)