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    Ccdc177 coiled-coil domain containing 177 [ Mus musculus (house mouse) ]

    Gene ID: 380768, updated on 27-Nov-2024

    Summary

    Official Symbol
    Ccdc177provided by MGI
    Official Full Name
    coiled-coil domain containing 177provided by MGI
    Primary source
    MGI:MGI:2686414
    See related
    Ensembl:ENSMUSG00000062961 AllianceGenome:MGI:2686414
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Gm1568
    Summary
    Orthologous to human CCDC177 (coiled-coil domain containing 177). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Biased expression in whole brain E14.5 (RPKM 4.6), CNS E14 (RPKM 3.8) and 8 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See Ccdc177 in Genome Data Viewer
    Location:
    12 C3; 12 37.02 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 12 NC_000078.7 (80802221..80807489, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 12 NC_000078.6 (80755447..80760715, complement)

    Chromosome 12 - NC_000078.7Genomic Context describing neighboring genes Neighboring gene pleckstrin homology domain containing, family D (with coiled-coil domains) member 1, opposite strand Neighboring gene pleckstrin homology domain containing, family D (with coiled-coil domains) member 1 Neighboring gene predicted gene, 51986 Neighboring gene STARR-seq mESC enhancer starr_32646 Neighboring gene STARR-seq mESC enhancer starr_32647 Neighboring gene STARR-seq mESC enhancer starr_32648 Neighboring gene sushi domain containing 6 Neighboring gene STARR-seq mESC enhancer starr_32649 Neighboring gene STARR-positive B cell enhancer ABC_E5337 Neighboring gene STARR-seq mESC enhancer starr_32653 Neighboring gene STARR-seq mESC enhancer starr_32654 Neighboring gene predicted gene, 23298

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Clone Names

    • MGC91363

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    General protein information

    Preferred Names
    coiled-coil domain-containing protein 177

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001008423.2NP_001008423.2  coiled-coil domain-containing protein 177

      See identical proteins and their annotated locations for NP_001008423.2

      Status: VALIDATED

      Source sequence(s)
      AK147473, BC067044, BY727768
      Consensus CDS
      CCDS26015.1
      UniProtKB/Swiss-Prot
      Q3UHB8, Q6NXJ5
      Related
      ENSMUSP00000072982.7, ENSMUST00000073251.8
      Conserved Domains (1) summary
      pfam15558
      Location:332705
      DUF4659; Domain of unknown function (DUF4659)

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000078.7 Reference GRCm39 C57BL/6J

      Range
      80802221..80807489 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)