Or10s1 olfactory receptor family 10 subfamily S member 1 [Rattus norvegicus (Norway rat)] - Gene

Summary

Official Symbol: Or10s1provided by RGD
Official Full Name: olfactory receptor family 10 subfamily S member 1provided by RGD
Primary source: RGD:1333299
See related: EnsemblRapid:ENSRNOG00000058978 AllianceGenome:RGD:1333299
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Rattus norvegicus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as: Olr1337; ratchr8-42975013-42975966_ORF
Summary: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. [provided by RefSeq, Jul 2008]
Orthologs: human mouse all
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Genomic context

Location:: 8q22

Exon count:: 2

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCr8 (GCF_036323735.1)	8	NC_086026.1 (49274175..49275225)
RS_2023_06	previous assembly	mRatBN7.2 (GCF_015227675.2)	8	NC_051343.1 (40377018..40378068)
106	previous assembly	Rnor_6.0 (GCF_000001895.5)	8	NC_005107.4 (43872728..43873681)

Chromosome 8 - NC_086026.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by RGD

Function	Evidence Code	Pubs
enables G protein-coupled receptor activity	IEA Inferred from Electronic Annotation more info
enables olfactory receptor activity	IBA Inferred from Biological aspect of Ancestor more info
enables olfactory receptor activity	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in G protein-coupled receptor signaling pathway	IEA Inferred from Electronic Annotation more info	PubMed
involved_in detection of chemical stimulus involved in sensory perception of smell	IBA Inferred from Biological aspect of Ancestor more info
involved_in detection of chemical stimulus involved in sensory perception of smell	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
is_active_in plasma membrane	IBA Inferred from Biological aspect of Ancestor more info

General protein information

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Preferred Names: olfactory receptor Olr1337

Names: olfactory receptor 1337; olfactory receptor gene Olr1337

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001000480.1 → NP_001000480.1 olfactory receptor Olr1337

Status: REVIEWED

Source sequence(s)

JAXUCZ010000008

UniProtKB/TrEMBL

A0A0G2JVM1, A6J3P3

Related

ENSRNOP00000069537.2, ENSRNOT00000079702.3

Conserved Domains (2) summary

pfam00001
Location:41 → 289

7tm_1; 7 transmembrane receptor (rhodopsin family)

cl21561
Location:34 → 303

7tm_4; Olfactory receptor

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

NC_086026.1 Reference GRCr8

Range

49274175..49275225

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_039081028.1 → XP_038936956.1 olfactory receptor Olr1337 isoform X1

UniProtKB/TrEMBL

A0A0G2JVM1, A6J3P3

Conserved Domains (2) summary

cd14964
Location:64 → 90

7tm_GPCRs; TM helix 2 [structural motif]

cl28897
Location:39 → 305

7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily