U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Zdhhc24 zinc finger, DHHC-type containing 24 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 293665, updated on 9-Dec-2024

    Summary

    Official Symbol
    Zdhhc24provided by RGD
    Official Full Name
    zinc finger, DHHC-type containing 24provided by RGD
    Primary source
    RGD:1565630
    See related
    EnsemblRapid:ENSRNOG00000019825 AllianceGenome:RGD:1565630
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Summary
    Predicted to enable protein-cysteine S-palmitoyltransferase activity. Predicted to be involved in protein targeting to membrane. Predicted to be located in membrane. Predicted to be active in Golgi apparatus and endoplasmic reticulum. Orthologous to human ZDHHC24 (zinc finger DHHC-type containing 24). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in Brain (RPKM 37.6), Kidney (RPKM 28.2) and 9 other tissues See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Zdhhc24 in Genome Data Viewer
    Location:
    1q43
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 1 NC_086019.1 (211605163..211612267)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 1 NC_051336.1 (202175832..202181943)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 1 NC_005100.4 (220137280..220143387)

    Chromosome 1 - NC_086019.1Genomic Context describing neighboring genes Neighboring gene cathepsin F Neighboring gene actinin alpha 3 Neighboring gene Bardet-Biedl syndrome 1 Neighboring gene uncharacterized LOC120099977 Neighboring gene dipeptidylpeptidase 3

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    General gene information

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    enables protein-cysteine S-palmitoyltransferase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Process Evidence Code Pubs
    involved_in protein targeting to membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    is_active_in Golgi apparatus IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    is_active_in endoplasmic reticulum IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    probable palmitoyltransferase ZDHHC24
    Names
    DHHC-24
    membrane-associated DHHC25 zinc finger protein
    membrane-associated zinc finger protein DHHC25
    zinc finger DHHC domain-containing protein 24
    zinc finger, DHHC domain containing 24
    NP_001034189.1
    XP_063142894.1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001039100.1NP_001034189.1  probable palmitoyltransferase ZDHHC24

      See identical proteins and their annotated locations for NP_001034189.1

      Status: PROVISIONAL

      Source sequence(s)
      AY886540
      UniProtKB/Swiss-Prot
      Q2TGI5
      UniProtKB/TrEMBL
      A6HZ03
      Related
      ENSRNOP00000026832.4, ENSRNOT00000026832.7
      Conserved Domains (1) summary
      pfam01529
      Location:95234
      zf-DHHC; DHHC palmitoyltransferase

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086019.1 Reference GRCr8

      Range
      211605163..211612267
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_063286824.1XP_063142894.1  probable palmitoyltransferase ZDHHC24 isoform X1