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    Ceacam9 CEA cell adhesion molecule 9 [ Mus musculus (house mouse) ]

    Gene ID: 26368, updated on 9-Dec-2024

    Summary

    Official Symbol
    Ceacam9provided by MGI
    Official Full Name
    CEA cell adhesion molecule 9provided by MGI
    Primary source
    MGI:MGI:1347247
    See related
    Ensembl:ENSMUSG00000007209 AllianceGenome:MGI:1347247
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Cea5; Cea-5; mmCGM8
    Summary
    Is expressed in placenta and primary trophoblast giant cell. Orthologous to human CEACAM21 (CEA cell adhesion molecule 21). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Restricted expression toward placenta adult (RPKM 28.0) See more
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    Genomic context

    See Ceacam9 in Genome Data Viewer
    Location:
    7 A2; 7 9.15 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (16455854..16460035)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (16721929..16726110)

    Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene predicted gene 8209 Neighboring gene 40S RIBOSOMAL PROTEIN S3A (V-FOS TRANSFORMATION EFFECTOR PROTEIN) Neighboring gene STARR-positive B cell enhancer ABC_E3700 Neighboring gene STARR-positive B cell enhancer ABC_E4899 Neighboring gene STARR-positive B cell enhancer ABC_E6517 Neighboring gene adaptor-related protein complex 2, sigma 1 subunit Neighboring gene CapStarr-seq enhancer MGSCv37_chr7:17351790-17352086 Neighboring gene STARR-positive B cell enhancer ABC_E694 Neighboring gene CapStarr-seq enhancer MGSCv37_chr7:17368547-17368700 Neighboring gene solute carrier family 1 (neutral amino acid transporter), member 5

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 
    • Targeted (1)  1 citation

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     

    General protein information

    Preferred Names
    CEA cell adhesion molecule 9
    Names
    CEA-related cell adhesion molecule 9
    carcinoembryonic antigen 5
    carcinoembryonic antigen-related cell adhesion molecule 9

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_011927.4NP_036057.1  CEA cell adhesion molecule 9 precursor

      See identical proteins and their annotated locations for NP_036057.1

      Status: PROVISIONAL

      Source sequence(s)
      AC148981
      Consensus CDS
      CCDS20852.1
      UniProtKB/TrEMBL
      Q78T27
      Related
      ENSMUSP00000001984.4, ENSMUST00000001984.5
      Conserved Domains (3) summary
      cd05774
      Location:35139
      Ig_CEACAM_D1; First immunoglobulin (Ig)-like domain of carcinoembryonic antigen (CEA) related cell adhesion molecule (CEACAM)
      smart00408
      Location:159220
      IGc2; Immunoglobulin C-2 Type
      smart00410
      Location:152219
      IG_like; Immunoglobulin like

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000073.7 Reference GRCm39 C57BL/6J

      Range
      16455854..16460035
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)