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    LOC100505909 histidine-rich glycoprotein [ Homo sapiens (human) ]

    Gene ID: 100505909, updated on 10-Dec-2024

    Summary

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    Gene symbol
    LOC100505909
    Gene description
    histidine-rich glycoprotein
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

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    See LOC100505909 in Genome Data Viewer
    Location:
    17q25.3
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 17 NC_000017.11 (83218400..83227851, complement)

    Chromosome 17 - NC_000017.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101929650 Neighboring gene uncharacterized LOC124904105 Neighboring gene uncharacterized LOC105371948 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 9233 Neighboring gene OCT4-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:81162966-81163480 Neighboring gene OCT4-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:81163481-81163995 Neighboring gene ribosomal protein L23a pseudogene 87

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Tissue-specific circular RNA induction during human fetal development
    • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
    • BioProject: PRJNA270632
    • Publication: PMID 26076956
    • Analysis date: Mon Apr 2 22:54:59 2018

    Bibliography

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    Related articles in PubMed

    1. Lineage-specific gene duplication and loss in human and great ape evolution. Fortna A, et al. PLoS Biol, 2004 Jul. PMID 15252450, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    See Variation Viewer (GRCh38)

    General gene information

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    Clone Names

    • AC139099.5

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000017.11 Reference GRCh38.p14 Primary Assembly

      Range
      83218400..83227851 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_933966.3 RNA Sequence

    Reference GRCh38.p14 PATCHES

    Genomic

    1. NW_025791804.1 Reference GRCh38.p14 PATCHES

      Range
      115648..125099 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_007069572.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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