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    KTN1-AS1 KTN1 antisense RNA 1 [ Homo sapiens (human) ]

    Gene ID: 100129075, updated on 10-Dec-2024

    Summary

    Official Symbol
    KTN1-AS1provided by HGNC
    Official Full Name
    KTN1 antisense RNA 1provided by HGNC
    Primary source
    HGNC:HGNC:19842
    See related
    Ensembl:ENSG00000186615 AllianceGenome:HGNC:19842
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    MYCLo-3; C14orf33
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

    See KTN1-AS1 in Genome Data Viewer
    Location:
    14q22.3
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 14 NC_000014.9 (55576157..55580092, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 14 NC_060938.1 (49781876..49785811, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 14 NC_000014.8 (56042875..56046810, complement)

    Chromosome 14 - NC_000014.9Genomic Context describing neighboring genes Neighboring gene ribosomal protein L7a pseudogene 4 Neighboring gene abl interactor 1 pseudogene 1 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 8434 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 8435 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 5785 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 5786 Neighboring gene Sharpr-MPRA regulatory region 13870 Neighboring gene kinectin 1 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr14:56166391-56166991 Neighboring gene uncharacterized LOC124903320

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    General gene information

    Markers

    Other Names

    • KTN1 antisense RNA 1 (non-protein coding)

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_027123.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AL138499, BX248296, DA616132
      Related
      ENST00000335142.7

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000014.9 Reference GRCh38.p14 Primary Assembly

      Range
      55576157..55580092 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060938.1 Alternate T2T-CHM13v2.0

      Range
      49781876..49785811 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)