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    Dsn1 DSN1 homolog, MIS12 kinetochore complex component [ Mus musculus (house mouse) ]

    Gene ID: 66934, updated on 9-Dec-2024

    Summary

    Official Symbol
    Dsn1provided by MGI
    Official Full Name
    DSN1 homolog, MIS12 kinetochore complex componentprovided by MGI
    Primary source
    MGI:MGI:1914184
    See related
    Ensembl:ENSMUSG00000027635 AllianceGenome:MGI:1914184
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    1700022L09Rik
    Summary
    Acts upstream of or within skeletal muscle satellite cell proliferation. Located in kinetochore. Is expressed in several structures, including brain and retina nuclear layer. Orthologous to human DSN1 (DSN1 component of MIS12 kinetochore complex). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Broad expression in liver E14 (RPKM 10.6), CNS E11.5 (RPKM 9.4) and 20 other tissues See more
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    See Dsn1 in Genome Data Viewer
    Location:
    2 H1; 2 77.89 cM
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (156836982..156848995, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (156995062..157007075, complement)

    Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene N-myc downstream regulated gene 3 Neighboring gene STARR-seq mESC enhancer starr_06193 Neighboring gene STARR-positive B cell enhancer ABC_E4513 Neighboring gene ribosomal protein S2 pseudogene Neighboring gene microtubule crosslinking factor 2 Neighboring gene STARR-seq mESC enhancer starr_06195 Neighboring gene STARR-seq mESC enhancer starr_06196 Neighboring gene TBC/LysM associated domain containing 2 Neighboring gene SAM domain and HD domain, 1 Neighboring gene STARR-seq mESC enhancer starr_06197 Neighboring gene STARR-positive B cell enhancer ABC_E6008 Neighboring gene STARR-positive B cell enhancer ABC_E7876 Neighboring gene STARR-positive B cell enhancer ABC_E2649

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Targeted (1) 

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    part_of MIS12/MIND type complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of MIS12/MIND type complex ISO
    Inferred from Sequence Orthology
    more info
     
    part_of MIS12/MIND type complex ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    part_of MIS12/MIND type complex NAS
    Non-traceable Author Statement
    more info
    PubMed 
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
     
    located_in cytosol ISO
    Inferred from Sequence Orthology
    more info
     
    located_in fibrillar center IEA
    Inferred from Electronic Annotation
    more info
     
    located_in fibrillar center ISO
    Inferred from Sequence Orthology
    more info
     
    located_in kinetochore IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in kinetochore ISO
    Inferred from Sequence Orthology
    more info
     
    located_in kinetochore NAS
    Non-traceable Author Statement
    more info
    PubMed 
    located_in nuclear body IEA
    Inferred from Electronic Annotation
    more info
     
    located_in nuclear body ISO
    Inferred from Sequence Orthology
    more info
     
    located_in nucleolus ISO
    Inferred from Sequence Orthology
    more info
     
    located_in nucleoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    located_in nucleus NAS
    Non-traceable Author Statement
    more info
    PubMed 
    located_in spindle pole NAS
    Non-traceable Author Statement
    more info
    PubMed 

    General protein information

    Preferred Names
    kinetochore-associated protein DSN1 homolog
    Names
    DSN1, MIND kinetochore complex component, homolog

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_025853.3NP_080129.2  kinetochore-associated protein DSN1 homolog

      See identical proteins and their annotated locations for NP_080129.2

      Status: VALIDATED

      Source sequence(s)
      AK006246, BC046807, CK333431
      Consensus CDS
      CCDS16972.1
      UniProtKB/Swiss-Prot
      Q9CYC5, Q9CYF2, Q9DA26
      Related
      ENSMUSP00000099418.3, ENSMUST00000103129.9
      Conserved Domains (1) summary
      pfam08202
      Location:76346
      MIS13; Mis12-Mtw1 protein family

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000068.8 Reference GRCm39 C57BL/6J

      Range
      156836982..156848995 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)