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    DNMBP-AS1 DNMBP antisense RNA 1 [ Homo sapiens (human) ]

    Gene ID: 100188954, updated on 10-Dec-2024

    Summary

    Official Symbol
    DNMBP-AS1provided by HGNC
    Official Full Name
    DNMBP antisense RNA 1provided by HGNC
    Primary source
    HGNC:HGNC:20431
    See related
    Ensembl:ENSG00000227695 AllianceGenome:HGNC:20431
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    NCRNA00093
    Expression
    Ubiquitous expression in skin (RPKM 3.0), endometrium (RPKM 2.9) and 25 other tissues See more
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    Genomic context

    See DNMBP-AS1 in Genome Data Viewer
    Location:
    10q24.2
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 10 NC_000010.11 (99927205..99958998)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 10 NC_060934.1 (100811000..100842791)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 10 NC_000010.10 (101686962..101718755)

    Chromosome 10 - NC_000010.11Genomic Context describing neighboring genes Neighboring gene MPRA-validated peak1067 silencer Neighboring gene cutC copper transporter Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 2698 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr10:101544125-101545324 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr10:101545341-101545842 Neighboring gene Nanog homeobox pseudogene 6 Neighboring gene ATP binding cassette subfamily C member 2 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr10:101589748-101590947 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr10:101593724-101594923 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:101609623-101610303 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3873 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:101650885-101651744 Neighboring gene dynamin binding protein Neighboring gene MED14-independent group 3 enhancer GRCh37_chr10:101665689-101666888 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:101673033-101673655 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:101673656-101674278 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:101716073-101716720 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:101716721-101717367 Neighboring gene uncharacterized LOC124902490 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3874 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3875 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3876 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3877 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 2699 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3878 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3879 Neighboring gene small nucleolar RNA U13

    Genomic regions, transcripts, and products

    Expression

    • Project title: Tissue-specific circular RNA induction during human fetal development
    • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
    • BioProject: PRJNA270632
    • Publication: PMID 26076956
    • Analysis date: Mon Apr 2 22:54:59 2018

    General gene information

    Markers

    Other Names

    • DNMBP antisense RNA 1 (non-protein coding)

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_024130.3 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AK098111, AL441886, AL627434
      Related
      ENST00000434409.2

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000010.11 Reference GRCh38.p14 Primary Assembly

      Range
      99927205..99958998
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060934.1 Alternate T2T-CHM13v2.0

      Range
      100811000..100842791
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)