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    TTTY17A testis expressed transcript, Y-linked 17A [ Homo sapiens (human) ]

    Gene ID: 252949, updated on 10-Dec-2024

    Summary

    Official Symbol
    TTTY17Aprovided by HGNC
    Official Full Name
    testis expressed transcript, Y-linked 17Aprovided by HGNC
    Primary source
    HGNC:HGNC:18841
    See related
    Ensembl:ENSG00000228240 MIM:400040; AllianceGenome:HGNC:18841
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    TTTY17; NCRNA00140
    Summary
    There are three copies of this gene on chromosome Y. This record represents the most centromeric copy. [provided by RefSeq, Jul 2008]
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    Genomic context

    See TTTY17A in Genome Data Viewer
    Location:
    Yq11.223
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) Y NC_000024.10 (22851584..22852715)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) Y NC_060948.1 (23687270..23688401)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) Y NC_000024.9 (24997731..24998862)

    Chromosome Y - NC_000024.10Genomic Context describing neighboring genes Neighboring gene RNA binding motif protein Y-linked family 2 member W, pseudogene Neighboring gene uncharacterized LOC107987348 Neighboring gene tripartite motif containing 60 pseudogene 4, Y-linked Neighboring gene zinc finger protein 736 pseudogene 11, Y-linked

    Genomic regions, transcripts, and products

    Expression

    • Project title: Tissue-specific circular RNA induction during human fetal development
    • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
    • BioProject: PRJNA270632
    • Publication: PMID 26076956
    • Analysis date: Mon Apr 2 22:54:59 2018

    General gene information

    Other Names

    • testis-specific transcript, Y-linked 17A (non-protein coding)

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_001526.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AF527829
      Related
      ENST00000416110.1

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000024.10 Reference GRCh38.p14 Primary Assembly

      Range
      22851584..22852715
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060948.1 Alternate T2T-CHM13v2.0

      Range
      23687270..23688401
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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