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    CXADRP3 CXADR pseudogene 3 [ Homo sapiens (human) ]

    Gene ID: 440224, updated on 10-Dec-2024

    Summary

    Official Symbol
    CXADRP3provided by HGNC
    Official Full Name
    CXADR pseudogene 3provided by HGNC
    Primary source
    HGNC:HGNC:33974
    See related
    Ensembl:ENSG00000293262 AllianceGenome:HGNC:33974
    Gene type
    pseudo
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Biased expression in testis (RPKM 5.0), colon (RPKM 0.3) and 1 other tissue See more
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    Genomic context

    See CXADRP3 in Genome Data Viewer
    Location:
    18p11.21
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 18 NC_000018.10 (14477952..14498721, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 18 NC_060942.1 (14640846..14661609, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 18 NC_000018.9 (14477951..14498720, complement)

    Chromosome 18 - NC_000018.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105372003 Neighboring gene ReSE screen-validated silencer GRCh37_chr18:14458017-14458177 Neighboring gene LONRF2 pseudogene 1 Neighboring gene GRAM domain containing 4 pseudogene 7 Neighboring gene POTE ankyrin domain family member C Neighboring gene RNA, U6 small nuclear 1021, pseudogene Neighboring gene uncharacterized LOC105372004 Neighboring gene olfactory receptor family 4 subfamily K member 7 pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Tissue-specific circular RNA induction during human fetal development
    • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
    • BioProject: PRJNA270632
    • Publication: PMID 26076956
    • Analysis date: Mon Apr 2 22:54:59 2018

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_024076.2 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AP006261
      Related
      ENST00000581457.1

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000018.10 Reference GRCh38.p14 Primary Assembly

      Range
      14477952..14498721 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060942.1 Alternate T2T-CHM13v2.0

      Range
      14640846..14661609 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)