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    LOC105372028 uncharacterized LOC105372028 [ Homo sapiens (human) ]

    Gene ID: 105372028, updated on 10-Dec-2024

    Summary

    Gene symbol
    LOC105372028
    Gene description
    uncharacterized LOC105372028
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

    See LOC105372028 in Genome Data Viewer
    Location:
    18q11.2
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 18 NC_000018.10 (24725781..24766645)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 18 NC_060942.1 (24920133..24961010)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 18 NC_000018.9 (22305745..22346609)

    Chromosome 18 - NC_000018.10Genomic Context describing neighboring genes Neighboring gene Rac family small GTPase 1 pseudogene 1 Neighboring gene peptidylprolyl isomerase A pseudogene 57 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_47845 Neighboring gene NANOG hESC enhancer GRCh37_chr18:22355329-22355830 Neighboring gene uncharacterized LOC105372029 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr18:22397209-22397842 Neighboring gene ReSE screen-validated silencer GRCh37_chr18:22404776-22404976 Neighboring gene NANOG hESC enhancer GRCh37_chr18:22442499-22443000 Neighboring gene ReSE screen-validated silencer GRCh37_chr18:22446838-22447019 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr18:22503864-22504549 Neighboring gene long intergenic non-protein coding RNA 1894 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 9369 Neighboring gene NANOG hESC enhancer GRCh37_chr18:22559116-22559673

    Genomic regions, transcripts, and products

    Expression

    • Project title: Tissue-specific circular RNA induction during human fetal development
    • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
    • BioProject: PRJNA270632
    • Publication: PMID 26076956
    • Analysis date: Mon Apr 2 22:54:59 2018

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_134604.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC022884, DA128369

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000018.10 Reference GRCh38.p14 Primary Assembly

      Range
      24725781..24766645
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060942.1 Alternate T2T-CHM13v2.0

      Range
      24920133..24961010
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)