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    SNORD12 small nucleolar RNA, C/D box 12 [ Homo sapiens (human) ]

    Gene ID: 692057, updated on 10-Dec-2024

    Summary

    Official Symbol
    SNORD12provided by HGNC
    Official Full Name
    small nucleolar RNA, C/D box 12provided by HGNC
    Primary source
    HGNC:HGNC:32708
    See related
    Ensembl:ENSG00000212304 AllianceGenome:HGNC:32708
    Gene type
    snoRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    HBII-99; MIR1259; MIRN1259
    Summary
    Predicted to be involved in RNA processing. Predicted to be located in nucleolus. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

    See SNORD12 in Genome Data Viewer
    Location:
    20q13.13
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 20 NC_000020.11 (49280683..49280772)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 20 NC_060944.1 (51050181..51050270)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 20 NC_000020.10 (47897220..47897309)

    Chromosome 20 - NC_000020.11Genomic Context describing neighboring genes Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr20:47900044-47900976 Neighboring gene H3K27ac hESC enhancer GRCh37_chr20:47902841-47903772 Neighboring gene H3K27ac hESC enhancer GRCh37_chr20:47903773-47904704 Neighboring gene small nucleolar RNA, C/D box 12C Neighboring gene ATAC-STARR-seq lymphoblastoid active region 18059 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 18060 Neighboring gene small nucleolar RNA, C/D box 12B Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr20:47909763-47910696 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr20:47910697-47911630 Neighboring gene H3K27ac hESC enhancer GRCh37_chr20:47911631-47912563 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr20:47913664-47914226 Neighboring gene ZNFX1 antisense RNA 1 Neighboring gene uncharacterized LOC124904925 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr20:47934991-47935572 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr20:47935573-47936154 Neighboring gene H3K27ac hESC enhancer GRCh37_chr20:47940265-47940766 Neighboring gene H3K27ac hESC enhancer GRCh37_chr20:47940767-47941266 Neighboring gene uncharacterized LOC105372649 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 18061 Neighboring gene NANOG hESC enhancer GRCh37_chr20:47985158-47985711 Neighboring gene ReSE screen-validated silencer GRCh37_chr20:47990213-47990475 Neighboring gene potassium voltage-gated channel subfamily B member 1 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr20:48040793-48041316 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr20:48041317-48041840

    Genomic regions, transcripts, and products

    General gene information

    Other Names

    • hsa-mir-1259
    • microRNA 1259

    Gene Ontology Provided by GOA

    Process Evidence Code Pubs
    involved_in RNA processing IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in nucleolus IEA
    Inferred from Electronic Annotation
    more info
     

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_003030.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AL049766
      Related
      ENST00000391002.1

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000020.11 Reference GRCh38.p14 Primary Assembly

      Range
      49280683..49280772
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060944.1 Alternate T2T-CHM13v2.0

      Range
      51050181..51050270
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)