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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_009548.2 RefSeqGene
- Range
-
5043..83246
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001144063.2 → NP_001137535.1 oxysterol-binding protein-related protein 5 isoform b
See identical proteins and their annotated locations for NP_001137535.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) lacks an in-frame exon compared to variant 1, resulting in a shorter isoform (b) compared to isoform a. Isoform b has a sterol-binding domain but lacks a complete pleckstrin homology domain. Variants 2 and 3 encode the same protein.
- Source sequence(s)
-
AC108448, AK293000, AL136918, BC032646, DC400863
- Consensus CDS
-
CCDS31343.1
- UniProtKB/TrEMBL
-
A8KAD5
- Related
- ENSP00000302872.8, ENST00000348039.9
- Conserved Domains (2) summary
-
- pfam01237
Location:303 → 641
- Oxysterol_BP; Oxysterol-binding protein
- cl17171
Location:134 → 180
- PH-like; Pleckstrin homology-like domain
-
NM_020896.4 → NP_065947.1 oxysterol-binding protein-related protein 5 isoform a
See identical proteins and their annotated locations for NP_065947.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) encodes the longer isoform (a). Isoform a has a pleckstrin homology domain and a sterol-binding domain.
- Source sequence(s)
-
AC108448, AL136918, BC039579, DC400863
- Consensus CDS
-
CCDS31344.1
- UniProtKB/Swiss-Prot
- A6NDP0, A6NJS8, B4DVB0, Q54A90, Q8N596, Q9BZB0, Q9H0X9, Q9P1Z4
- UniProtKB/TrEMBL
-
A8KAD5
- Related
- ENSP00000263650.7, ENST00000263650.12
- Conserved Domains (2) summary
-
- cd13286
Location:120 → 248
- PH_OPR5_ORP8; Human Oxysterol binding protein related proteins 5 and 8 Pleckstrin homology (PH) domain
- pfam01237
Location:374 → 709
- Oxysterol_BP; Oxysterol-binding protein
-
NM_145638.3 → NP_663613.1 oxysterol-binding protein-related protein 5 isoform b
See identical proteins and their annotated locations for NP_663613.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) differs in the 5' UTR and lacks an in-frame exon compared to variant 1, resulting in a shorter isoform (b) compared to isoform a. Isoform b has a sterol-binding domain but lacks a complete pleckstrin homology domain. Variants 2 and 3 encode the same protein.
- Source sequence(s)
-
AC108448, AL136918, BC032646, DC400863
- Consensus CDS
-
CCDS31343.1
- UniProtKB/TrEMBL
-
A8KAD5
- Related
- ENSP00000374639.3, ENST00000389989.7
- Conserved Domains (2) summary
-
- pfam01237
Location:303 → 641
- Oxysterol_BP; Oxysterol-binding protein
- cl17171
Location:134 → 180
- PH-like; Pleckstrin homology-like domain
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000011.10 Reference GRCh38.p14 Primary Assembly
- Range
-
3087107..3165310 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_017017163.3 → XP_016872652.1 oxysterol-binding protein-related protein 5 isoform X1
- UniProtKB/Swiss-Prot
- A6NDP0, A6NJS8, B4DVB0, Q54A90, Q8N596, Q9BZB0, Q9H0X9, Q9P1Z4
- UniProtKB/TrEMBL
-
A8KAD5
- Conserved Domains (2) summary
-
- cd13286
Location:120 → 248
- PH_OPR5_ORP8; Human Oxysterol binding protein related proteins 5 and 8 Pleckstrin homology (PH) domain
- pfam01237
Location:374 → 709
- Oxysterol_BP; Oxysterol-binding protein
-
XM_011519873.4 → XP_011518175.1 oxysterol-binding protein-related protein 5 isoform X1
See identical proteins and their annotated locations for XP_011518175.1
- UniProtKB/Swiss-Prot
- A6NDP0, A6NJS8, B4DVB0, Q54A90, Q8N596, Q9BZB0, Q9H0X9, Q9P1Z4
- UniProtKB/TrEMBL
-
A8KAD5
- Conserved Domains (2) summary
-
- cd13286
Location:120 → 248
- PH_OPR5_ORP8; Human Oxysterol binding protein related proteins 5 and 8 Pleckstrin homology (PH) domain
- pfam01237
Location:374 → 709
- Oxysterol_BP; Oxysterol-binding protein
Alternate T2T-CHM13v2.0
Genomic
-
NC_060935.1 Alternate T2T-CHM13v2.0
- Range
-
3176307..3255561 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054367594.1 → XP_054223569.1 oxysterol-binding protein-related protein 5 isoform X1
- UniProtKB/Swiss-Prot
- A6NDP0, A6NJS8, B4DVB0, Q54A90, Q8N596, Q9BZB0, Q9H0X9, Q9P1Z4
- UniProtKB/TrEMBL
-
A8KAD5
-
XM_054367593.1 → XP_054223568.1 oxysterol-binding protein-related protein 5 isoform X1
- UniProtKB/Swiss-Prot
- A6NDP0, A6NJS8, B4DVB0, Q54A90, Q8N596, Q9BZB0, Q9H0X9, Q9P1Z4
- UniProtKB/TrEMBL
-
A8KAD5