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    Gpr55 G protein-coupled receptor 55 [ Mus musculus (house mouse) ]

    Gene ID: 227326, updated on 9-Dec-2024

    Summary

    Official Symbol
    Gpr55provided by MGI
    Official Full Name
    G protein-coupled receptor 55provided by MGI
    Primary source
    MGI:MGI:2685064
    See related
    Ensembl:ENSMUSG00000049608 AllianceGenome:MGI:2685064
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    CTFL; Gm218; Lpir1
    Summary
    Predicted to enable cannabinoid receptor activity. Predicted to be involved in several processes, including bone resorption; negative regulation of osteoclast differentiation; and positive regulation of intracellular signal transduction. Predicted to be active in plasma membrane. Is expressed in cerebral cortex; forebrain; neural retina; and retina. Orthologous to human GPR55 (G protein-coupled receptor 55). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Broad expression in testis adult (RPKM 1.4), small intestine adult (RPKM 1.0) and 15 other tissues See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Gpr55 in Genome Data Viewer
    Location:
    1 C5; 1 43.94 cM
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 1 NC_000067.7 (85860927..85924781, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 1 NC_000067.6 (85933221..85991583, complement)

    Chromosome 1 - NC_000067.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 32302 Neighboring gene predicted gene, 51745 Neighboring gene RIKEN cDNA 4933407L21 gene Neighboring gene STARR-seq mESC enhancer starr_01557 Neighboring gene predicted gene, 41905 Neighboring gene STARR-positive B cell enhancer ABC_E5777 Neighboring gene predicted gene, 53569 Neighboring gene zinc finger protein 617 pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (4) 
    • Targeted (4)  1 citation

    Pathways from PubChem

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables cannabinoid receptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables cannabinoid receptor activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables cannabinoid receptor activity ISO
    Inferred from Sequence Orthology
    more info
     
    Process Evidence Code Pubs
    involved_in G protein-coupled receptor signaling pathway IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in bone resorption IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in bone resorption ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in cannabinoid signaling pathway IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in negative regulation of osteoclast differentiation IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in negative regulation of osteoclast differentiation ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in phospholipase C-activating G protein-coupled receptor signaling pathway ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in positive regulation of ERK1 and ERK2 cascade ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of ERK1 and ERK2 cascade ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in positive regulation of Rho protein signal transduction ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of Rho protein signal transduction ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    Component Evidence Code Pubs
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in plasma membrane ISO
    Inferred from Sequence Orthology
    more info
     
    located_in plasma membrane ISS
    Inferred from Sequence or Structural Similarity
    more info
     

    General protein information

    Preferred Names
    G-protein coupled receptor 55

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001033290.3NP_001028462.2  G-protein coupled receptor 55

      See identical proteins and their annotated locations for NP_001028462.2

      Status: VALIDATED

      Source sequence(s)
      AC102506, AC107707
      Consensus CDS
      CCDS15115.1
      UniProtKB/Swiss-Prot
      Q3UJF0
      UniProtKB/TrEMBL
      Q14BV9
      Related
      ENSMUSP00000084196.5, ENSMUST00000086975.7
      Conserved Domains (2) summary
      cd14964
      Location:2047
      7tm_GPCRs; TM helix 1 [structural motif]
      cl28897
      Location:20305
      7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000067.7 Reference GRCm39 C57BL/6J

      Range
      85860927..85924781 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_017320337.3XP_017175826.1  G-protein coupled receptor 55 isoform X4

      UniProtKB/Swiss-Prot
      Q3UJF0
      UniProtKB/TrEMBL
      Q14BV9
      Conserved Domains (2) summary
      cd14964
      Location:2047
      7tm_GPCRs; TM helix 1 [structural motif]
      cl28897
      Location:20305
      7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily
    2. XM_011247986.4XP_011246288.1  G-protein coupled receptor 55 isoform X1

      See identical proteins and their annotated locations for XP_011246288.1

      UniProtKB/TrEMBL
      Q14BV9
      Conserved Domains (2) summary
      cd14964
      Location:4875
      7tm_GPCRs; TM helix 1 [structural motif]
      cl28897
      Location:48333
      7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily
    3. XM_006529459.5XP_006529522.1  G-protein coupled receptor 55 isoform X2

      UniProtKB/TrEMBL
      Q14BV9
      Conserved Domains (2) summary
      cd14964
      Location:3764
      7tm_GPCRs; TM helix 1 [structural motif]
      cl28897
      Location:37322
      7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily
    4. XM_036164492.1XP_036020385.1  G-protein coupled receptor 55 isoform X4

      UniProtKB/Swiss-Prot
      Q3UJF0
      UniProtKB/TrEMBL
      Q14BV9
      Conserved Domains (2) summary
      cd14964
      Location:2047
      7tm_GPCRs; TM helix 1 [structural motif]
      cl28897
      Location:20305
      7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily
    5. XM_030253716.2XP_030109576.1  G-protein coupled receptor 55 isoform X4

      UniProtKB/Swiss-Prot
      Q3UJF0
      UniProtKB/TrEMBL
      Q14BV9
      Conserved Domains (2) summary
      cd14964
      Location:2047
      7tm_GPCRs; TM helix 1 [structural motif]
      cl28897
      Location:20305
      7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily
    6. XM_030253705.2XP_030109565.1  G-protein coupled receptor 55 isoform X1

      UniProtKB/TrEMBL
      Q14BV9
      Conserved Domains (2) summary
      cd14964
      Location:4875
      7tm_GPCRs; TM helix 1 [structural motif]
      cl28897
      Location:48333
      7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily
    7. XM_030253706.2XP_030109566.1  G-protein coupled receptor 55 isoform X1

      UniProtKB/TrEMBL
      Q14BV9
      Conserved Domains (2) summary
      cd14964
      Location:4875
      7tm_GPCRs; TM helix 1 [structural motif]
      cl28897
      Location:48333
      7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily
    8. XM_030253715.2XP_030109575.1  G-protein coupled receptor 55 isoform X3

      UniProtKB/TrEMBL
      Q14BV9
      Conserved Domains (2) summary
      cd14964
      Location:3259
      7tm_GPCRs; TM helix 1 [structural motif]
      cl28897
      Location:32317
      7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily
    9. XM_030253712.2XP_030109572.1  G-protein coupled receptor 55 isoform X2

      UniProtKB/TrEMBL
      Q14BV9
      Conserved Domains (2) summary
      cd14964
      Location:3764
      7tm_GPCRs; TM helix 1 [structural motif]
      cl28897
      Location:37322
      7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily
    10. XM_030253718.2XP_030109578.1  G-protein coupled receptor 55 isoform X4

      UniProtKB/Swiss-Prot
      Q3UJF0
      UniProtKB/TrEMBL
      Q14BV9
      Conserved Domains (2) summary
      cd14964
      Location:2047
      7tm_GPCRs; TM helix 1 [structural motif]
      cl28897
      Location:20305
      7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily