gins1 GINS complex subunit 1 (Psf1 homolog) [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: gins1provided by ZNC
Official Full Name: GINS complex subunit 1 (Psf1 homolog)provided by ZNC
Primary source: ZFIN:ZDB-GENE-041010-184
See related: Ensembl:ENSDARG00000007624 AllianceGenome:ZFIN:ZDB-GENE-041010-184
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: zgc:101672
Summary: Predicted to be involved in DNA strand elongation involved in mitotic DNA replication. Predicted to act upstream of or within DNA replication. Predicted to be located in nucleus. Predicted to be part of GINS complex. Is expressed in proliferative region. Human ortholog(s) of this gene implicated in immunodeficiency 55. Orthologous to human GINS1 (GINS complex subunit 1). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 13

Exon count:: 7

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	13	NC_007124.7 (7164345..7170352)
105	previous assembly	GRCz10 (GCF_000002035.5)	13	NC_007124.6 (9852873..9858880)

Chromosome 13 - NC_007124.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

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General gene information

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Gene Ontology Provided by ZFIN

Process	Evidence Code	Pubs
acts_upstream_of_or_within DNA replication	IEA Inferred from Electronic Annotation more info
involved_in DNA strand elongation involved in mitotic DNA replication	IBA Inferred from Biological aspect of Ancestor more info

Component	Evidence Code	Pubs
part_of GINS complex	IBA Inferred from Biological aspect of Ancestor more info
part_of GINS complex	IEA Inferred from Electronic Annotation more info
located_in nucleus	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: DNA replication complex GINS protein PSF1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001006081.1 → NP_001006081.1 DNA replication complex GINS protein PSF1

See identical proteins and their annotated locations for NP_001006081.1

Status: PROVISIONAL

Source sequence(s)

BC083239

UniProtKB/TrEMBL

Q5XJQ9

Related

ENSDARP00000017647.7, ENSDART00000022051.9

Conserved Domains (2) summary

cd11710
Location:3 → 130

GINS_A_psf1; Alpha-helical domain of GINS complex protein Psf1

COG5230
Location:1 → 191

COG5230; Uncharacterized conserved protein [Function unknown]