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    kansl2 KAT8 regulatory NSL complex subunit 2 [ Danio rerio (zebrafish) ]

    Gene ID: 449817, updated on 9-Dec-2024

    Summary

    Official Symbol
    kansl2provided by ZNC
    Official Full Name
    KAT8 regulatory NSL complex subunit 2provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-041010-67
    See related
    Ensembl:ENSDARG00000056318 AllianceGenome:ZFIN:ZDB-GENE-041010-67
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    id:ibd2059; wu:fb75c02; zgc:103534
    Summary
    Predicted to act upstream of or within chromatin organization. Predicted to be located in mitochondrion and nucleus. Predicted to be part of histone acetyltransferase complex. Is expressed in notochord. Orthologous to human KANSL2 (KAT8 regulatory NSL complex subunit 2). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    See kansl2 in Genome Data Viewer
    Location:
    chromosome: 23
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 23 NC_007134.7 (24599031..24609494)
    105 previous assembly GRCz10 (GCF_000002035.5) 23 NC_007134.6 (24672252..24682953)

    Chromosome 23 - NC_007134.7Genomic Context describing neighboring genes Neighboring gene transmembrane protein 240a Neighboring gene mutL homolog 3 (E. coli) Neighboring gene small nucleolar RNA SNORA2/SNORA34 family Neighboring gene NCK-associated protein 5-like Neighboring gene microRNA 26b Neighboring gene CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General gene information

    Markers

    Gene Ontology Provided by ZFIN

    Process Evidence Code Pubs
    acts_upstream_of_or_within chromatin organization IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    part_of histone acetyltransferase complex IEA
    Inferred from Electronic Annotation
    more info
     
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
     
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    KAT8 regulatory NSL complex subunit 2

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001005990.1NP_001005990.1  KAT8 regulatory NSL complex subunit 2

      See identical proteins and their annotated locations for NP_001005990.1

      Status: PROVISIONAL

      Source sequence(s)
      BC083416
      UniProtKB/TrEMBL
      A0A8M1N2N8, Q5XJ88
      Related
      ENSDARP00000105294.2, ENSDART00000126510.4
      Conserved Domains (1) summary
      pfam13891
      Location:2892
      zf-C3Hc3H; Potential DNA-binding domain

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007134.7 Reference GRCz11 Primary Assembly

      Range
      24599031..24609494
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_068216740.1XP_068072841.1  KAT8 regulatory NSL complex subunit 2 isoform X1

      UniProtKB/TrEMBL
      A0A8M2B8Z9, A9JTE3
    2. XM_005162163.5XP_005162220.1  KAT8 regulatory NSL complex subunit 2 isoform X1

      See identical proteins and their annotated locations for XP_005162220.1

      UniProtKB/TrEMBL
      A0A8M2B8Z9, A9JTE3
      Related
      ENSDARP00000073257.3, ENSDART00000078796.5
      Conserved Domains (1) summary
      pfam13891
      Location:2892
      zf-C3Hc3H; Potential DNA-binding domain

    Reference GRCz11 ALT_DRER_TU_1

    Genomic

    1. NW_018395151.1 Reference GRCz11 ALT_DRER_TU_1

      Range
      219367..227442
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)