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    zgc:63587 zgc:63587 [ Danio rerio (zebrafish) ]

    Gene ID: 393431, updated on 4-Jan-2025

    Summary

    Official Symbol
    zgc:63587provided by ZNC
    Official Full Name
    zgc:63587provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-040426-1175
    See related
    Ensembl:ENSDARG00000017140 AllianceGenome:ZFIN:ZDB-GENE-040426-1175
    Gene type
    protein coding
    RefSeq status
    PREDICTED
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Summary
    Predicted to enable GTP binding activity. Predicted to act upstream of or within cell division. Predicted to be located in several cellular components, including ciliary membrane; cleavage furrow; and midbody. [provided by Alliance of Genome Resources, Jan 2025]
    Orthologs
    NEW
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    Genomic context

    See zgc:63587 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 8 NC_007119.7 (4621243..4694458, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 8 NC_007119.6 (4564976..4638232, complement)

    Chromosome 8 - NC_007119.7Genomic Context describing neighboring genes Neighboring gene glycoprotein Ib platelet subunit beta Neighboring gene septin 5a Neighboring gene U1 spliceosomal RNA Neighboring gene claudin 5a

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General gene information

    Markers

    Clone Names

    • MGC63587

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables nucleotide binding IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    acts_upstream_of_or_within cell division IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in cell projection IEA
    Inferred from Electronic Annotation
    more info
     
    located_in ciliary membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in cleavage furrow IEA
    Inferred from Electronic Annotation
    more info
     
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in midbody IEA
    Inferred from Electronic Annotation
    more info
     
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in spindle IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    uncharacterized protein LOC393431

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_200459.1NP_956753.1  uncharacterized protein LOC393431

      See identical proteins and their annotated locations for NP_956753.1

      Status: PREDICTED

      Source sequence(s)
      BC055151
      UniProtKB/TrEMBL
      A0A8M1PEH3, F6NST7, Q7SY26
      Related
      ENSDARP00000027643.10, ENSDART00000019828.10
      Conserved Domains (1) summary
      cl21455
      Location:33238
      P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007119.7 Reference GRCz11 Primary Assembly

      Range
      4621243..4694458 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005172457.5XP_005172514.1  uncharacterized protein LOC393431 isoform X1

      UniProtKB/TrEMBL
      A0A8M2BJN0
      Conserved Domains (2) summary
      COG5019
      Location:15325
      CDC3; Septin family protein [Cell cycle control, cell division, chromosome partitioning, Cytoskeleton]
      pfam00735
      Location:33305
      Septin; Septin