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    crygm2f crystallin, gamma M2f [ Danio rerio (zebrafish) ]

    Gene ID: 558389, updated on 9-Dec-2024

    Summary

    Official Symbol
    crygm2fprovided by ZNC
    Official Full Name
    crystallin, gamma M2fprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-080220-17
    See related
    Ensembl:ENSDARG00000078134 AllianceGenome:ZFIN:ZDB-GENE-080220-17
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    zgc:172241
    Summary
    Predicted to be a structural constituent of eye lens. Predicted to be involved in lens development in camera-type eye and visual perception. Is expressed in lens. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    NEW
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    Genomic context

    See crygm2f in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 9 NC_007120.7 (22344595..22345500, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 9 NC_007120.6 (22533726..22534631, complement)

    Chromosome 9 - NC_007120.7Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC137496470 Neighboring gene crystallin, gamma M2d1 Neighboring gene crystallin, gamma M5 Neighboring gene crystallin, gamma M3 Neighboring gene crystallin, gamma S4

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Clone Names

    • MGC172241

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables structural constituent of eye lens IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Process Evidence Code Pubs
    involved_in lens development in camera-type eye IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in visual perception IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001110106.1NP_001103576.1  crystallin, gamma M2f

      See identical proteins and their annotated locations for NP_001103576.1

      Status: PROVISIONAL

      Source sequence(s)
      BC154048
      UniProtKB/TrEMBL
      A0A8M1NGC3, A8KBB6
      Related
      ENSDARP00000092578.3, ENSDART00000101802.4
      Conserved Domains (1) summary
      pfam00030
      Location:90169
      Crystall; Beta/Gamma crystallin

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007120.7 Reference GRCz11 Primary Assembly

      Range
      22344595..22345500 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCz11 ALT_DRER_TU_1

    Genomic

    1. NW_018394751.1 Reference GRCz11 ALT_DRER_TU_1

      Range
      155554..156461 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)