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    cops9 COP9 signalosome subunit 9 [ Danio rerio (zebrafish) ]

    Gene ID: 393820, updated on 9-Dec-2024

    Summary

    Official Symbol
    cops9provided by ZNC
    Official Full Name
    COP9 signalosome subunit 9provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-040426-1883
    See related
    Ensembl:ENSDARG00000045296 AllianceGenome:ZFIN:ZDB-GENE-040426-1883
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    myeov2; zgc:77808
    Summary
    Predicted to be involved in cellular response to UV and positive regulation of cell population proliferation. Predicted to be located in chromatin; cytoplasm; and nucleoplasm. Predicted to be part of COP9 signalosome. Orthologous to human COPS9 (COP9 signalosome subunit 9). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See cops9 in Genome Data Viewer
    Location:
    chromosome: 24
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 24 NC_007135.7 (26284494..26302419, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 24 NC_007135.6 (26139453..26157378, complement)

    Chromosome 24 - NC_007135.7Genomic Context describing neighboring genes Neighboring gene adiponectin, C1Q and collagen domain containing, a Neighboring gene actinodin1 Neighboring gene otospiralin Neighboring gene apolipoprotein Db

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General gene information

    Clone Names

    • MGC77808

    Gene Ontology Provided by ZFIN

    Process Evidence Code Pubs
    involved_in cellular response to UV  
    involved_in positive regulation of cell population proliferation  
    Component Evidence Code Pubs
    part_of COP9 signalosome  
    part_of COP9 signalosome  
    located_in chromatin  
    located_in cytoplasm  
    located_in cytoplasm  
    located_in nucleoplasm  
    located_in nucleus  
    located_in nucleus  

    General protein information

    Preferred Names
    COP9 signalosome complex subunit 9
    Names
    myeloma overexpressed 2
    myeloma-overexpressed gene 2 protein homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_200847.2 → NP_957141.2  COP9 signalosome complex subunit 9

      See identical proteins and their annotated locations for NP_957141.2

      Status: VALIDATED

      Source sequence(s)
      CR450695, EH449636
      UniProtKB/Swiss-Prot
      Q6P6E6
      Related
      ENSDARP00000106916.2, ENSDART00000130696.3
      Conserved Domains (1) summary
      pfam15004
      Location:1 → 50
      MYEOV2; Myeloma-overexpressed-like

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007135.7 Reference GRCz11 Primary Assembly

      Range
      26284494..26302419 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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