arglu1a arginine and glutamate rich 1a [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: arglu1aprovided by ZNC
Official Full Name: arginine and glutamate rich 1aprovided by ZNC
Primary source: ZFIN:ZDB-GENE-040426-2914
See related: Ensembl:ENSDARG00000019223 AllianceGenome:ZFIN:ZDB-GENE-040426-2914
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: arglu1; zgc:55375; zgc:77695; wu:fa03a12
Summary: Predicted to enable nuclear receptor coactivator activity and pre-mRNA binding activity. Predicted to be involved in regulation of alternative mRNA splicing, via spliceosome. Predicted to be located in nuclear speck. Predicted to be active in mitochondrion and nucleoplasm. Is expressed in brain. Orthologous to human ARGLU1 (arginine and glutamate rich 1). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs: all
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Genomic context

Location:: chromosome: 9

Exon count:: 4

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	9	NC_007120.7 (26086212..26096612)
105	previous assembly	GRCz10 (GCF_000002035.5)	9	NC_007120.6 (26275343..26285743)

Chromosome 9 - NC_007120.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Markers

fb18g07.x1 (e-PCR)
- UniSTS:203023

fb70f12.y1 (e-PCR)
- UniSTS:191034

AA495423 (e-PCR)
- UniSTS:206948

fc62c02.x1 (e-PCR)
- UniSTS:194168

fi22f03.x1 (e-PCR)
- UniSTS:197046

Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables molecular_function	ND No biological Data available more info
enables nuclear receptor coactivator activity	ISS Inferred from Sequence or Structural Similarity more info
enables pre-mRNA binding	ISS Inferred from Sequence or Structural Similarity more info

Process	Evidence Code	Pubs
involved_in biological_process	ND No biological Data available more info
involved_in regulation of alternative mRNA splicing, via spliceosome	ISS Inferred from Sequence or Structural Similarity more info

Component	Evidence Code	Pubs
is_active_in mitochondrion	IBA Inferred from Biological aspect of Ancestor more info
located_in nuclear speck	ISS Inferred from Sequence or Structural Similarity more info
is_active_in nucleoplasm	IBA Inferred from Biological aspect of Ancestor more info

General protein information

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Preferred Names: arginine and glutamate-rich protein 1-A

Names: arginine and glutamate rich 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.