U.S. flag

An official website of the United States government

Links from GEO Profiles

    • Showing Current items.

    EOLA2 endothelium and lymphocyte associated ASCH domain 2 [ Homo sapiens (human) ]

    Gene ID: 541578, updated on 10-Dec-2024

    Summary

    Official Symbol
    EOLA2provided by HGNC
    Official Full Name
    endothelium and lymphocyte associated ASCH domain 2provided by HGNC
    Primary source
    HGNC:HGNC:17402
    See related
    Ensembl:ENSG00000197021 AllianceGenome:HGNC:17402
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    CXorf40B
    Summary
    Located in mitochondrion. [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Ubiquitous expression in adrenal (RPKM 9.8), placenta (RPKM 4.0) and 25 other tissues See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See EOLA2 in Genome Data Viewer
    Location:
    Xq28
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) X NC_000023.11 (149929532..149938491, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) X NC_060947.1 (148191783..148206745, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) X NC_000023.10 (149100415..149106709, complement)

    Chromosome X - NC_000023.11Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid active region 30017 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 30018 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 30019 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 30020 Neighboring gene long intergenic non-protein coding RNA 850 Neighboring gene MAGEA8 antisense RNA 1 Neighboring gene MAGE family member A8 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 21046 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 21047 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 21048 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 21049 Neighboring gene EOLA2 divergent transcript Neighboring gene heat shock transcription factor family, X-linked member 4 Neighboring gene nucleolar protein 11 pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Tissue-specific circular RNA induction during human fetal development
    • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
    • BioProject: PRJNA270632
    • Publication: PMID 26076956
    • Analysis date: Mon Apr 2 22:54:59 2018

    General gene information

    Clone Names

    • FLJ16523

    Gene Ontology Provided by GOA

    Component Evidence Code Pubs
    located_in mitochondrion PubMed 

    General protein information

    Preferred Names
    protein EOLA2
    Names
    protein CXorf40B

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001013845.2NP_001013867.1  protein EOLA2

      See identical proteins and their annotated locations for NP_001013867.1

      Status: VALIDATED

      Source sequence(s)
      BC009523, BM847839, U66042
      Consensus CDS
      CCDS35426.1
      UniProtKB/Swiss-Prot
      Q96DE9
      UniProtKB/TrEMBL
      S4R3G8
      Related
      ENSP00000359434.3, ENST00000370406.8
      Conserved Domains (1) summary
      smart01022
      Location:6108
      ASCH; The ASCH domain adopts a beta-barrel fold similar to that of the PUA domain

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000023.11 Reference GRCh38.p14 Primary Assembly

      Range
      149929532..149938491 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_024452391.2XP_024308159.1  protein EOLA2 isoform X2

      UniProtKB/TrEMBL
      Q5HY62, S4R3G8
      Conserved Domains (1) summary
      smart01022
      Location:6108
      ASCH; The ASCH domain adopts a beta-barrel fold similar to that of the PUA domain
    2. XM_047442179.1XP_047298135.1  protein EOLA2 isoform X2

      UniProtKB/TrEMBL
      Q5HY62, S4R3G8
    3. XM_011531181.4XP_011529483.1  protein EOLA2 isoform X2

      UniProtKB/TrEMBL
      Q5HY62, S4R3G8
      Related
      ENSP00000417546.1, ENST00000462691.5
      Conserved Domains (1) summary
      smart01022
      Location:6108
      ASCH; The ASCH domain adopts a beta-barrel fold similar to that of the PUA domain
    4. XM_017029593.3XP_016885082.1  protein EOLA2 isoform X2

      UniProtKB/TrEMBL
      Q5HY62, S4R3G8
      Conserved Domains (1) summary
      smart01022
      Location:6108
      ASCH; The ASCH domain adopts a beta-barrel fold similar to that of the PUA domain
    5. XM_017029592.3XP_016885081.1  protein EOLA2 isoform X2

      UniProtKB/TrEMBL
      Q5HY62, S4R3G8
      Conserved Domains (1) summary
      smart01022
      Location:6108
      ASCH; The ASCH domain adopts a beta-barrel fold similar to that of the PUA domain
    6. XM_047442178.1XP_047298134.1  protein EOLA2 isoform X2

      UniProtKB/TrEMBL
      Q5HY62, S4R3G8
    7. XM_017029591.3XP_016885080.1  protein EOLA2 isoform X2

      UniProtKB/TrEMBL
      Q5HY62, S4R3G8
      Conserved Domains (1) summary
      smart01022
      Location:6108
      ASCH; The ASCH domain adopts a beta-barrel fold similar to that of the PUA domain
    8. XM_047442177.1XP_047298133.1  protein EOLA2 isoform X2

      UniProtKB/TrEMBL
      Q5HY62, S4R3G8
    9. XM_005274702.4XP_005274759.1  protein EOLA2 isoform X1

      See identical proteins and their annotated locations for XP_005274759.1

      UniProtKB/Swiss-Prot
      Q96DE9
      UniProtKB/TrEMBL
      S4R3G8
      Related
      ENSP00000347339.2, ENST00000355203.6
      Conserved Domains (1) summary
      smart01022
      Location:6108
      ASCH; The ASCH domain adopts a beta-barrel fold similar to that of the PUA domain
    10. XM_006724826.4XP_006724889.1  protein EOLA2 isoform X1

      See identical proteins and their annotated locations for XP_006724889.1

      UniProtKB/Swiss-Prot
      Q96DE9
      UniProtKB/TrEMBL
      S4R3G8
      Conserved Domains (1) summary
      smart01022
      Location:6108
      ASCH; The ASCH domain adopts a beta-barrel fold similar to that of the PUA domain
    11. XM_005274700.3XP_005274757.1  protein EOLA2 isoform X1

      See identical proteins and their annotated locations for XP_005274757.1

      UniProtKB/Swiss-Prot
      Q96DE9
      UniProtKB/TrEMBL
      S4R3G8
      Related
      ENSP00000474324.1, ENST00000370409.7
      Conserved Domains (1) summary
      smart01022
      Location:6108
      ASCH; The ASCH domain adopts a beta-barrel fold similar to that of the PUA domain
    12. XM_005274698.3XP_005274755.1  protein EOLA2 isoform X1

      See identical proteins and their annotated locations for XP_005274755.1

      UniProtKB/Swiss-Prot
      Q96DE9
      UniProtKB/TrEMBL
      S4R3G8
      Related
      ENSP00000359432.1, ENST00000370404.5
      Conserved Domains (1) summary
      smart01022
      Location:6108
      ASCH; The ASCH domain adopts a beta-barrel fold similar to that of the PUA domain
    13. XM_005274699.3XP_005274756.1  protein EOLA2 isoform X1

      See identical proteins and their annotated locations for XP_005274756.1

      UniProtKB/Swiss-Prot
      Q96DE9
      UniProtKB/TrEMBL
      S4R3G8
      Conserved Domains (1) summary
      smart01022
      Location:6108
      ASCH; The ASCH domain adopts a beta-barrel fold similar to that of the PUA domain
    14. XM_047442174.1XP_047298130.1  protein EOLA2 isoform X1

      UniProtKB/Swiss-Prot
      Q96DE9
      UniProtKB/TrEMBL
      S4R3G8
    15. XM_017029585.3XP_016885074.1  protein EOLA2 isoform X1

      UniProtKB/Swiss-Prot
      Q96DE9
      UniProtKB/TrEMBL
      S4R3G8
      Conserved Domains (1) summary
      smart01022
      Location:6108
      ASCH; The ASCH domain adopts a beta-barrel fold similar to that of the PUA domain
    16. XM_005274701.4XP_005274758.1  protein EOLA2 isoform X1

      See identical proteins and their annotated locations for XP_005274758.1

      UniProtKB/Swiss-Prot
      Q96DE9
      UniProtKB/TrEMBL
      S4R3G8
      Conserved Domains (1) summary
      smart01022
      Location:6108
      ASCH; The ASCH domain adopts a beta-barrel fold similar to that of the PUA domain
    17. XM_017029588.3XP_016885077.1  protein EOLA2 isoform X1

      UniProtKB/Swiss-Prot
      Q96DE9
      UniProtKB/TrEMBL
      S4R3G8
      Conserved Domains (1) summary
      smart01022
      Location:6108
      ASCH; The ASCH domain adopts a beta-barrel fold similar to that of the PUA domain
    18. XM_011531180.3XP_011529482.1  protein EOLA2 isoform X1

      See identical proteins and their annotated locations for XP_011529482.1

      UniProtKB/Swiss-Prot
      Q96DE9
      UniProtKB/TrEMBL
      S4R3G8
      Conserved Domains (1) summary
      smart01022
      Location:6108
      ASCH; The ASCH domain adopts a beta-barrel fold similar to that of the PUA domain
    19. XM_017029589.2XP_016885078.1  protein EOLA2 isoform X1

      UniProtKB/Swiss-Prot
      Q96DE9
      UniProtKB/TrEMBL
      S4R3G8
      Conserved Domains (1) summary
      smart01022
      Location:6108
      ASCH; The ASCH domain adopts a beta-barrel fold similar to that of the PUA domain
    20. XM_047442175.1XP_047298131.1  protein EOLA2 isoform X1

      UniProtKB/Swiss-Prot
      Q96DE9
      UniProtKB/TrEMBL
      S4R3G8
    21. XM_047442176.1XP_047298132.1  protein EOLA2 isoform X1

      UniProtKB/Swiss-Prot
      Q96DE9
      UniProtKB/TrEMBL
      S4R3G8

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060947.1 Alternate T2T-CHM13v2.0

      Range
      148191783..148206745 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_054327241.1XP_054183216.1  protein EOLA2 isoform X2

      UniProtKB/TrEMBL
      Q5HY62, S4R3G8
    2. XM_054327238.1XP_054183213.1  protein EOLA2 isoform X2

      UniProtKB/TrEMBL
      Q5HY62, S4R3G8
    3. XM_054327240.1XP_054183215.1  protein EOLA2 isoform X2

      UniProtKB/TrEMBL
      Q5HY62, S4R3G8
    4. XM_054327243.1XP_054183218.1  protein EOLA2 isoform X2

      UniProtKB/TrEMBL
      Q5HY62, S4R3G8
    5. XM_054327244.1XP_054183219.1  protein EOLA2 isoform X2

      UniProtKB/TrEMBL
      Q5HY62, S4R3G8
    6. XM_054327237.1XP_054183212.1  protein EOLA2 isoform X2

      UniProtKB/TrEMBL
      Q5HY62, S4R3G8
    7. XM_054327242.1XP_054183217.1  protein EOLA2 isoform X2

      UniProtKB/TrEMBL
      Q5HY62, S4R3G8
    8. XM_054327239.1XP_054183214.1  protein EOLA2 isoform X2

      UniProtKB/TrEMBL
      Q5HY62, S4R3G8
    9. XM_054327233.1XP_054183208.1  protein EOLA2 isoform X1

      UniProtKB/Swiss-Prot
      Q96DE9
      UniProtKB/TrEMBL
      S4R3G8
    10. XM_054327222.1XP_054183197.1  protein EOLA2 isoform X1

      UniProtKB/Swiss-Prot
      Q96DE9
      UniProtKB/TrEMBL
      S4R3G8
    11. XM_054327227.1XP_054183202.1  protein EOLA2 isoform X1

      UniProtKB/Swiss-Prot
      Q96DE9
      UniProtKB/TrEMBL
      S4R3G8
    12. XM_054327225.1XP_054183200.1  protein EOLA2 isoform X1

      UniProtKB/Swiss-Prot
      Q96DE9
      UniProtKB/TrEMBL
      S4R3G8
    13. XM_054327228.1XP_054183203.1  protein EOLA2 isoform X1

      UniProtKB/Swiss-Prot
      Q96DE9
      UniProtKB/TrEMBL
      S4R3G8
    14. XM_054327234.1XP_054183209.1  protein EOLA2 isoform X1

      UniProtKB/Swiss-Prot
      Q96DE9
      UniProtKB/TrEMBL
      S4R3G8
    15. XM_054327224.1XP_054183199.1  protein EOLA2 isoform X1

      UniProtKB/Swiss-Prot
      Q96DE9
      UniProtKB/TrEMBL
      S4R3G8
    16. XM_054327230.1XP_054183205.1  protein EOLA2 isoform X1

      UniProtKB/Swiss-Prot
      Q96DE9
      UniProtKB/TrEMBL
      S4R3G8
    17. XM_054327229.1XP_054183204.1  protein EOLA2 isoform X1

      UniProtKB/Swiss-Prot
      Q96DE9
      UniProtKB/TrEMBL
      S4R3G8
    18. XM_054327231.1XP_054183206.1  protein EOLA2 isoform X1

      UniProtKB/Swiss-Prot
      Q96DE9
      UniProtKB/TrEMBL
      S4R3G8
    19. XM_054327226.1XP_054183201.1  protein EOLA2 isoform X1

      UniProtKB/Swiss-Prot
      Q96DE9
      UniProtKB/TrEMBL
      S4R3G8
    20. XM_054327223.1XP_054183198.1  protein EOLA2 isoform X1

      UniProtKB/Swiss-Prot
      Q96DE9
      UniProtKB/TrEMBL
      S4R3G8
    21. XM_054327236.1XP_054183211.1  protein EOLA2 isoform X1

      UniProtKB/Swiss-Prot
      Q96DE9
      UniProtKB/TrEMBL
      S4R3G8
    22. XM_054327235.1XP_054183210.1  protein EOLA2 isoform X1

      UniProtKB/Swiss-Prot
      Q96DE9
      UniProtKB/TrEMBL
      S4R3G8
    23. XM_054327232.1XP_054183207.1  protein EOLA2 isoform X1

      UniProtKB/Swiss-Prot
      Q96DE9
      UniProtKB/TrEMBL
      S4R3G8

    External link. Please review our privacy policy.