U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    sna-2 Small Nuclear RNA (snRNA) Associated protein [ Caenorhabditis elegans ]

    Gene ID: 177816, updated on 9-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    sna-2
    Official Full Name
    Small Nuclear RNA (snRNA) Associated protein
    Primary source
    WormBase:WBGene00011747
    Locus tag
    CELE_T13F2.7
    See related
    AllianceGenome:WB:WBGene00011747
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Is expressed widely. [provided by Alliance of Genome Resources, Dec 2024]
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See sna-2 in Genome Data Viewer
    Location:
    chromosome: IV
    Exon count:
    7
    Sequence:
    Chromosome: IV; NC_003282.8 (9774605..9777634, complement)

    Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene Major sperm protein 78 Neighboring gene Caveolin;Caveolin-1 Neighboring gene DUF4210 domain-containing protein Neighboring gene Serpentine Receptor, class E (Epsilon) Neighboring gene ncRNA

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003282.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A novel family of C. elegans snRNPs contains proteins associated with trans-splicing. MacMorris M, et al. RNA, 2007 Apr. PMID 17283210, Free PMC Article
    2. An in vivo genetic screen for genes involved in spliced leader trans-splicing indicates a crucial role for continuous de novo spliced leader RNP assembly. Philippe L, et al. Nucleic Acids Res, 2017 Aug 21. PMID 28582530, Free PMC Article
    3. A high-throughput screen for the identification of compounds that inhibit nematode gene expression by targeting spliced leader trans-splicing. Pandarakalam GC, et al. Int J Parasitol Drugs Drug Resist, 2019 Aug. PMID 31015150, Free PMC Article
    4. A novel, essential trans-splicing protein connects the nematode SL1 snRNP to the CBC-ARS2 complex. Fasimoye RY, et al. Nucleic Acids Res, 2022 Jul 22. PMID 35736244, Free PMC Article
    5. A combined binary interaction and phenotypic map of C. elegans cell polarity proteins. Koorman T, et al. Nat Cell Biol, 2016 Mar. PMID 26780296, Free PMC Article

    See all (10) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

    Go to the top of the page Help
    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    General protein information

    Go to the top of the page Help
    Preferred Names
    Small Nuclear RNA (snRNA) Associated protein
    NP_501744.1
    • Product from WormBase gene class sna;
      Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003282.8 Reference assembly

      Range
      9774605..9777634 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_069343.7 → NP_501744.1  Small Nuclear RNA (snRNA) Associated protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_501744.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q94050
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Tools