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    PLP1 Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 829861, updated on 18-Sep-2024

    Summary

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    Official Symbol
    PLP1
    Official Full Name
    Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein
    Primary source
    TAIR:AT4G37070
    Locus tag
    AT4G37070
    See related
    Araport:AT4G37070
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    AP22.83; AP22_83; AtPLAIVA; phospholipase A IVA; PLA IVA
    Summary
    Patatin-related phospholipase A. Expressed strongly and exclusively in roots. AtplaIVA-null mutants have reduced lateral root development. Phosphorylation by calcium-dependent protein kinases in vitro enhances its activity.
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    Genomic context

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    See PLP1 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    7
    Sequence:
    Chromosome: 4; NC_003075.7 (17464594..17467186, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene methionine aminopeptidase 1D Neighboring gene PATATIN-like protein 4 Neighboring gene PATATIN-like protein 5 Neighboring gene ternary complex factor MIP1 leucine-zipper protein (Protein of unknown function, DUF547) Neighboring gene UDP-N-acetylmuramoyl-L-alanyl-D-glutamate-2, 6-diaminopimelate ligase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Roles of Arabidopsis patatin-related phospholipases a in root development are related to auxin responses and phosphate deficiency. Rietz S, et al. Mol Plant, 2010 May. PMID 20053799
    2. Novel Aquaporin Regulatory Mechanisms Revealed by Interactomics. Bellati J, et al. Mol Cell Proteomics, 2016 Nov. PMID 27609422, Free PMC Article
    3. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_001085037.2
    NM_119870.2
    NM_179180.3
    NM_179181.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables monoacylglycerol lipase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables phospholipase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within lateral root formation IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein
    NP_001078506.1
    • PLP1; CONTAINS InterPro DOMAIN/s: Acyl transferase/acyl hydrolase/lysophospholipase (InterPro:IPR016035), Patatin (InterPro:IPR002641); BEST Arabidopsis thaliana protein match is: PATATIN-like protein 5 (TAIR:AT4G37060.1); Has 1996 Blast hits to 1989 proteins in 369 species: Archae - 0; Bacteria - 491; Metazoa - 206; Fungi - 135; Plants - 869; Viruses - 0; Other Eukaryotes - 295 (source: NCBI BLink).
    NP_568015.1
    • PLP1; CONTAINS InterPro DOMAIN/s: Acyl transferase/acyl hydrolase/lysophospholipase (InterPro:IPR016035), Patatin (InterPro:IPR002641); BEST Arabidopsis thaliana protein match is: PATATIN-like protein 5 (TAIR:AT4G37060.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    NP_849511.1
    • PLP1; CONTAINS InterPro DOMAIN/s: Acyl transferase/acyl hydrolase/lysophospholipase (InterPro:IPR016035), Patatin (InterPro:IPR002641); BEST Arabidopsis thaliana protein match is: PATATIN-like protein 5 (TAIR:AT4G37060.1); Has 2116 Blast hits to 2106 proteins in 385 species: Archae - 0; Bacteria - 498; Metazoa - 234; Fungi - 173; Plants - 892; Viruses - 0; Other Eukaryotes - 319 (source: NCBI BLink).
    NP_849512.3
    • PLP1; CONTAINS InterPro DOMAIN/s: Acyl transferase/acyl hydrolase/lysophospholipase (InterPro:IPR016035), Patatin (InterPro:IPR002641); BEST Arabidopsis thaliana protein match is: PATATIN-like protein 5 (TAIR:AT4G37060.1); Has 2103 Blast hits to 2094 proteins in 385 species: Archae - 0; Bacteria - 498; Metazoa - 223; Fungi - 173; Plants - 890; Viruses - 0; Other Eukaryotes - 319 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      17464594..17467186 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_179180.3 → NP_849511.1  Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_849511.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4JR94, O23148, O23179, Q8LBT5
      UniProtKB/TrEMBL
      A0A178UVZ8, A0A654FWB5
      Conserved Domains (1) summary
      cd07214
      Location:16 → 366
      Pat17_isozyme_like; Patatin-like phospholipase of plants

    2. NM_119870.2 → NP_568015.1  Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_568015.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9XZM2, A0A654FWB5
      Conserved Domains (1) summary
      cd07214
      Location:16 → 366
      Pat17_isozyme_like; Patatin-like phospholipase of plants

    3. NM_001085037.2 → NP_001078506.1  Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001078506.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654FWB5, A8MR01
      Conserved Domains (1) summary
      cd07214
      Location:16 → 355
      Pat17_isozyme_like; Patatin-like phospholipase of plants

    4. NM_179181.3 → NP_849512.3  Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_849512.3

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9XZM2, A0A654FWB5
      Conserved Domains (1) summary
      cd07214
      Location:16 → 366
      Pat17_isozyme_like; Patatin-like phospholipase of plants
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    O23179.2

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