U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Guca2a guanylate cyclase activator 2A [ Rattus norvegicus (Norway rat) ]

    Gene ID: 25656, updated on 27-Nov-2024

    Summary

    Official Symbol
    Guca2aprovided by RGD
    Official Full Name
    guanylate cyclase activator 2Aprovided by RGD
    Primary source
    RGD:2766
    See related
    EnsemblRapid:ENSRNOG00000008849 AllianceGenome:RGD:2766
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    Guca2; GUANYL; Guanylin
    Summary
    Enables guanylate cyclase activator activity. Predicted to be located in extracellular region. Orthologous to human GUCA2A (guanylate cyclase activator 2A). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Biased expression in Kidney (RPKM 65.0), Lung (RPKM 5.9) and 2 other tissues See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Guca2a in Genome Data Viewer
    Location:
    5q36
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 5 NC_086023.1 (138522446..138524288)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 5 NC_051340.1 (133237177..133239019)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 5 NC_005104.4 (138685634..138687476)

    Chromosome 5 - NC_086023.1Genomic Context describing neighboring genes Neighboring gene forkhead box J3 Neighboring gene ribosomal protein S27a, pseudogene 1 Neighboring gene ubiquitin-like FUBI-ribosomal protein eS30 fusion protein Neighboring gene guanylate cyclase activator 2B Neighboring gene uncharacterized LOC134486983

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Pathways from PubChem

    General protein information

    Preferred Names
    guanylin
    Names
    guanylate cyclase activator 2 (guanylin)
    guanylate cyclase activator 2a (guanylin)

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_013118.1NP_037250.1  guanylin precursor

      See identical proteins and their annotated locations for NP_037250.1

      Status: PROVISIONAL

      Source sequence(s)
      M95493
      UniProtKB/Swiss-Prot
      P28902
      UniProtKB/TrEMBL
      A6JZP6
      Related
      ENSRNOP00000011867.2, ENSRNOT00000011867.6
      Conserved Domains (1) summary
      pfam02058
      Location:22115
      Guanylin; Guanylin precursor

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086023.1 Reference GRCr8

      Range
      138522446..138524288
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)