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    Or13d1 olfactory receptor family 13 subfamily D member 1 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 298038, updated on 9-Dec-2024

    Summary

    Official Symbol
    Or13d1provided by RGD
    Official Full Name
    olfactory receptor family 13 subfamily D member 1provided by RGD
    Primary source
    RGD:1334138
    See related
    EnsemblRapid:ENSRNOG00000072622 AllianceGenome:RGD:1334138
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    Olr853
    Summary
    Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. [provided by RefSeq, Jul 2008]
    Orthologs
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    Genomic context

    See Or13d1 in Genome Data Viewer
    Location:
    5q23
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 5 NC_086023.1 (72384695..72385633)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 5 NC_051340.1 (67589306..67590244)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 5 NC_005104.4 (69784806..69785744)

    Chromosome 5 - NC_086023.1Genomic Context describing neighboring genes Neighboring gene olfactory receptor family 13 subfamily C member 25 Neighboring gene olfactory receptor family 13 subfamily C member 9 Neighboring gene U6atac minor spliceosomal RNA Neighboring gene nipsnap homolog 3A (C. elegans)

    Genomic regions, transcripts, and products

    General protein information

    Preferred Names
    olfactory receptor Olr853
    Names
    olfactory receptor 853
    olfactory receptor gene Olr853

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001000398.1NP_001000398.1  olfactory receptor Olr853

      See identical proteins and their annotated locations for NP_001000398.1

      Status: REVIEWED

      Source sequence(s)
      JAXUCZ010000005
      UniProtKB/TrEMBL
      A6KDN4, F1LW03
      Related
      ENSRNOP00000100858.1, ENSRNOT00000139826.1
      Conserved Domains (2) summary
      pfam00001
      Location:39288
      7tm_1; 7 transmembrane receptor (rhodopsin family)
      cl21561
      Location:32304
      7tm_4; Olfactory receptor

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086023.1 Reference GRCr8

      Range
      72384695..72385633
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)