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    C14h7orf57 similar to human chromosome 7 open reading frame 57 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 688553, updated on 4-Jan-2025

    Summary

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    Official Symbol
    C14h7orf57provided by RGD
    Official Full Name
    similar to human chromosome 7 open reading frame 57provided by RGD
    Primary source
    RGD:1587626
    See related
    EnsemblRapid:ENSRNOG00000037632 AllianceGenome:RGD:1587626
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    RGD1565273
    Summary
    Orthologous to human C7orf57 (chromosome 7 open reading frame 57). [provided by Alliance of Genome Resources, Jan 2025]
    Expression
    Biased expression in Kidney (RPKM 271.2), Testes (RPKM 45.2) and 2 other tissues See more
    Orthologs
    human mouse all
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    Genomic context

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    See C14h7orf57 in Genome Data Viewer
    Location:
    14q21
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 14 NC_086032.1 (87962231..87982043)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 14 NC_051349.1 (83748478..83768293)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 14 NC_005113.4 (89253102..89272283)

    Chromosome 14 - NC_086032.1Genomic Context describing neighboring genes Neighboring gene polycystin 1 like 1, transient receptor potential channel interacting Neighboring gene HUS1 checkpoint clamp component Neighboring gene Sad1 and UNC84 domain containing 3 Neighboring gene uridine phosphorylase 1 Neighboring gene 60S ribosomal protein L35a pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Bibliography

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    Related articles in PubMed

    1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Clone Names

    • MGC156806

    General protein information

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    Preferred Names
    uncharacterized protein C7orf57 homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001135915.1 → NP_001129387.1  uncharacterized protein C7orf57 homolog

      See identical proteins and their annotated locations for NP_001129387.1

      Status: PROVISIONAL

      Source sequence(s)
      BC127536
      UniProtKB/Swiss-Prot
      A0JPQ1
      UniProtKB/TrEMBL
      A0A8L2QG77
      Related
      ENSRNOP00000082043.1, ENSRNOT00000113242.2

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086032.1 Reference GRCr8

      Range
      87962231..87982043
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_039092456.2 → XP_038948384.1  uncharacterized protein C7orf57 homolog isoform X1

      Related
      ENSRNOP00000101237.1, ENSRNOT00000160075.1
      Conserved Domains (1) summary
      pfam17662
      Location:1 → 276
      DUF5524; Family of unknown function (DUF5524)

    2. XM_063273632.1 → XP_063129702.1  uncharacterized protein C7orf57 homolog isoform X2

    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A0JPQ1.1 GenPept UniProtKB/Swiss-Prot:A0JPQ1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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