Ccdc89 coiled-coil domain containing 89 [Mus musculus (house mouse)] - Gene

Summary

Official Symbol: Ccdc89provided by MGI
Official Full Name: coiled-coil domain containing 89provided by MGI
Primary source: MGI:MGI:1917304
See related: Ensembl:ENSMUSG00000044362 AllianceGenome:MGI:1917304
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Mus musculus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as: BOIP; 1700019B01Rik
Summary: Predicted to be located in nucleus. Is expressed in several structures, including brain; liver; salivary gland; spleen; and testis. Orthologous to human CCDC89 (coiled-coil domain containing 89). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs: human all
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Genomic context

Location:: 7 E1; 7 50.58 cM

Exon count:: 1

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCm39 (GCF_000001635.27)	7	NC_000073.7 (90075520..90077872)
108.20200622	previous assembly	GRCm38.p6 (GCF_000001635.26)	7	NC_000073.6 (90426312..90428664)

Chromosome 7 - NC_000073.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

BOIP is a novel cDNA highly expressed during spermatogenesis that encodes a protein interacting with the orange domain of the hairy-related transcription factor HRT1/Hey1 in Xenopus and mouse [BOIP]
Title: Identification of BOIP, a novel cDNA highly expressed during spermatogenesis that encodes a protein interacting with the orange domain of the hairy-related transcription factor HRT1/Hey1 in Xenopus and mouse.

Submit: New GeneRIF Correction

Variation

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Alleles

Alleles of this type are documented at Mouse Genome Informatics (MGI)

Endonuclease-mediated (3)

Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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Gene Ontology Provided by MGI

Function	Evidence Code	Pubs
enables protein binding	IPI Inferred from Physical Interaction more info	PubMed

Process	Evidence Code	Pubs
involved_in biological_process	ND No biological Data available more info

Component	Evidence Code	Pubs
located_in cytoplasm	IEA Inferred from Electronic Annotation more info
located_in intracellular anatomical structure	ISS Inferred from Sequence or Structural Similarity more info	PubMed
located_in nucleus	ISS Inferred from Sequence or Structural Similarity more info	PubMed

General protein information

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Preferred Names: coiled-coil domain-containing protein 89

Names: bc8 orange-interacting protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_027298.1 → NP_081574.1 coiled-coil domain-containing protein 89

See identical proteins and their annotated locations for NP_081574.1

Status: VALIDATED

Source sequence(s)

AC100322, BC060150, BG081193

Consensus CDS

CCDS52308.1

UniProtKB/Swiss-Prot

Q9DA73

Related

ENSMUSP00000060309.8, ENSMUST00000061391.9

Conserved Domains (1) summary

COG1196
Location:20 → 369

Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]