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    Cst7 cystatin F (leukocystatin) [ Mus musculus (house mouse) ]

    Gene ID: 13011, updated on 9-Dec-2024

    Summary

    Official Symbol
    Cst7provided by MGI
    Official Full Name
    cystatin F (leukocystatin)provided by MGI
    Primary source
    MGI:MGI:1298217
    See related
    Ensembl:ENSMUSG00000068129 AllianceGenome:MGI:1298217
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Cmap
    Summary
    Enables cysteine-type endopeptidase inhibitor activity. Involved in negative regulation of peptidase activity. Acts upstream of or within inhibition of cysteine-type endopeptidase activity; negative regulation of microglial cell activation; and positive regulation of myelination. Located in several cellular components, including Golgi apparatus; late endosome; and lysosome. Is expressed in several structures, including early conceptus and female reproductive system. Orthologous to human CST7 (cystatin F). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in mammary gland adult (RPKM 5.2), spleen adult (RPKM 4.9) and 13 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See Cst7 in Genome Data Viewer
    Location:
    2 G3; 2 74.67 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (150412335..150420864)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (150570415..150578944)

    Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene BTB (POZ) domain containing 1 pseudogene Neighboring gene ankyrin and armadillo repeat containing pseudogene Neighboring gene STARR-seq mESC enhancer starr_06007 Neighboring gene CapStarr-seq enhancer MGSCv37_chr2:150404413-150404596 Neighboring gene adipocyte plasma membrane associated protein Neighboring gene STARR-positive B cell enhancer ABC_E2647 Neighboring gene predicted gene, 52532 Neighboring gene acyl-CoA synthetase short-chain family member 1

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (3) 
    • Targeted (2)  1 citation

    General gene information

    Markers

    Clone Names

    • MGC151424, MGC151426

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables cysteine-type endopeptidase inhibitor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables cysteine-type endopeptidase inhibitor activity IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    enables peptidase inhibitor activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables peptidase inhibitor activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables protein homodimerization activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables protein homodimerization activity ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    is_active_in Golgi apparatus IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in Golgi apparatus IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in Golgi apparatus ISO
    Inferred from Sequence Orthology
    more info
     
    located_in cytoplasm IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in cytoplasmic vesicle IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    located_in cytoplasmic vesicle ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in endoplasmic reticulum IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in endoplasmic reticulum IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    located_in endoplasmic reticulum ISO
    Inferred from Sequence Orthology
    more info
     
    located_in endosome ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in extracellular space IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in extracellular space IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in extracellular space ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in late endosome IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in late endosome IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    is_active_in lysosome IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in lysosome IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    located_in lysosome ISO
    Inferred from Sequence Orthology
    more info
     
    located_in multivesicular body IEA
    Inferred from Electronic Annotation
    more info
     
    located_in multivesicular body ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    cystatin-F
    Names
    cystatin-7
    cystatin-like metastasis-associated protein

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_009977.3NP_034107.2  cystatin-F precursor

      See identical proteins and their annotated locations for NP_034107.2

      Status: VALIDATED

      Source sequence(s)
      AK004420, BX630680
      Consensus CDS
      CCDS16857.2
      UniProtKB/Swiss-Prot
      O89098
      UniProtKB/TrEMBL
      Q3TCR2
      Related
      ENSMUSP00000086606.3, ENSMUST00000089200.3
      Conserved Domains (1) summary
      smart00043
      Location:35144
      CY; Cystatin-like domain

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000068.8 Reference GRCm39 C57BL/6J

      Range
      150412335..150420864
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)