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    Samd15 sterile alpha motif domain containing 15 [ Mus musculus (house mouse) ]

    Gene ID: 238333, updated on 9-Dec-2024

    Summary

    Official Symbol
    Samd15provided by MGI
    Official Full Name
    sterile alpha motif domain containing 15provided by MGI
    Primary source
    MGI:MGI:2685109
    See related
    Ensembl:ENSMUSG00000090812 AllianceGenome:MGI:2685109
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Gm263
    Summary
    Predicted to enable protein serine/threonine kinase activator activity. Predicted to be involved in signal transduction. Orthologous to human SAMD15 (sterile alpha motif domain containing 15). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in testis adult (RPKM 4.2), cortex adult (RPKM 0.3) and 3 other tissues See more
    Orthologs
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    Genomic context

    See Samd15 in Genome Data Viewer
    Location:
    12 D2; 12 41.4 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 12 NC_000078.7 (87247240..87260315)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 12 NC_000078.6 (87194484..87213541)

    Chromosome 12 - NC_000078.7Genomic Context describing neighboring genes Neighboring gene protein-O-mannosyltransferase 2 Neighboring gene STARR-positive B cell enhancer ABC_E10770 Neighboring gene STARR-positive B cell enhancer ABC_E10771 Neighboring gene glutathione transferase zeta 1 (maleylacetoacetate isomerase) Neighboring gene predicted gene 6566 Neighboring gene transmembrane p24 trafficking protein 8 Neighboring gene STARR-positive B cell enhancer ABC_E9041 Neighboring gene NADP+ dependent oxidoreductase domain containing 1 Neighboring gene VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog Neighboring gene AHA1, activator of heat shock protein ATPase 1

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General protein information

    Preferred Names
    sterile alpha motif domain-containing protein 15
    Names
    SAM domain-containing protein 15

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001290288.2NP_001277217.1  sterile alpha motif domain-containing protein 15

      See identical proteins and their annotated locations for NP_001277217.1

      Status: VALIDATED

      Source sequence(s)
      AC132609, CJ060055
      Consensus CDS
      CCDS70409.1
      UniProtKB/Swiss-Prot
      F6XZJ7
      Related
      ENSMUSP00000138551.2, ENSMUST00000182869.2
      Conserved Domains (2) summary
      cd09530
      Location:478544
      SAM_Samd14; SAM domain of Samd14 subfamily
      smart00454
      Location:479533
      SAM; Sterile alpha motif

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000078.7 Reference GRCm39 C57BL/6J

      Range
      87247240..87260315
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_004937499.1 RNA Sequence