Rnase11 ribonuclease, RNase A family, 11 (non-active) [Mus musculus (house mouse)] - Gene

Summary

Official Symbol: Rnase11provided by MGI
Official Full Name: ribonuclease, RNase A family, 11 (non-active)provided by MGI
Primary source: MGI:MGI:3528583
See related: Ensembl:ENSMUSG00000059648 AllianceGenome:MGI:3528583
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Mus musculus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as: Raj1
Summary: Predicted to enable nucleic acid binding activity. Predicted to be involved in defense response to Gram-positive bacterium. Predicted to be located in extracellular region. Orthologous to human RNASE11 (ribonuclease A family member 11 (inactive)). [provided by Alliance of Genome Resources, Jan 2025]
Expression: Restricted expression toward genital fat pad adult (RPKM 8.1) See more
Orthologs: human all
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Genomic context

Location:: 14 C1; 14 26.36 cM

Exon count:: 4

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCm39 (GCF_000001635.27)	14	NC_000080.7 (51286150..51293159, complement)
108.20200622	previous assembly	GRCm38.p6 (GCF_000001635.26)	14	NC_000080.6 (51048693..51055702, complement)

Chromosome 14 - NC_000080.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Mouse ENCODE transcriptome data
Description: RNA profiling data sets generated by the Mouse ENCODE project.
BioProject: PRJNA66167
Publication: PMID 25409824
Analysis date: n/a

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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Variation

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Alleles

Alleles of this type are documented at Mouse Genome Informatics (MGI)

Endonuclease-mediated (3)

General gene information

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Gene Ontology Provided by MGI

Function	Evidence Code	Pubs
NOT enables RNA nuclease activity	IKR Inferred from Key Residues more info	PubMed
enables molecular_function	ND No biological Data available more info
enables nucleic acid binding	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
involved_in biological_process	ND No biological Data available more info
involved_in defense response to Gram-positive bacterium	IBA Inferred from Biological aspect of Ancestor more info

Component	Evidence Code	Pubs
is_active_in cellular_component	ND No biological Data available more info
located_in extracellular region	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: putative inactive ribonuclease 11

Names: ribonuclease A j1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001011877.2 → NP_001011877.1 putative inactive ribonuclease 11 precursor

Status: VALIDATED

Source sequence(s)

AC136376

Consensus CDS

CCDS27031.1

UniProtKB/Swiss-Prot

B9EJ01, Q5GAM9

UniProtKB/TrEMBL

W0UVF9

Related

ENSMUSP00000075472.4, ENSMUST00000076106.4

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

NC_000080.7 Reference GRCm39 C57BL/6J

Range

51286150..51293159 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_006519222.3 → XP_006519285.2 putative inactive ribonuclease 11 isoform X1
XM_011245112.2 → XP_011243414.1 putative inactive ribonuclease 11 isoform X2

UniProtKB/Swiss-Prot

B9EJ01, Q5GAM9

UniProtKB/TrEMBL

W0UVF9
XM_006519220.2 → XP_006519283.1 putative inactive ribonuclease 11 isoform X2

UniProtKB/Swiss-Prot

B9EJ01, Q5GAM9

UniProtKB/TrEMBL

W0UVF9