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    Nradd neurotrophin receptor associated death domain [ Mus musculus (house mouse) ]

    Gene ID: 67169, updated on 27-Nov-2024

    Summary

    Official Symbol
    Nraddprovided by MGI
    Official Full Name
    neurotrophin receptor associated death domainprovided by MGI
    Primary source
    MGI:MGI:1914419
    See related
    Ensembl:ENSMUSG00000032491 AllianceGenome:MGI:1914419
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    NRDD; NRH2; PLAIDD; 2610311B09Rik
    Summary
    Predicted to enable several functions, including coreceptor activity; nerve growth factor binding activity; and neurotrophin p75 receptor binding activity. Predicted to be involved in Rho protein signal transduction. Located in lamellipodium; membrane; and nuclear envelope lumen. Is expressed in dorsal root ganglion; medulla oblongata; retina layer; and spinal cord. Orthologous to human NRADDP (neurotrophin receptor associated death domain, pseudogene). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Broad expression in ovary adult (RPKM 18.1), limb E14.5 (RPKM 13.0) and 21 other tissues See more
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    Genomic context

    See Nradd in Genome Data Viewer
    Location:
    9 F2; 9 60.26 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 9 NC_000075.7 (110450203..110453461, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 9 NC_000075.6 (110621135..110624393, complement)

    Chromosome 9 - NC_000075.7Genomic Context describing neighboring genes Neighboring gene kinesin family member 9 Neighboring gene STARR-seq mESC enhancer starr_25264 Neighboring gene SET domain containing 2 Neighboring gene STARR-seq mESC enhancer starr_25267 Neighboring gene neurobeachin-like 2 Neighboring gene CapStarr-seq enhancer MGSCv37_chr9:110547743-110548020 Neighboring gene microRNA 8107 Neighboring gene STARR-positive B cell enhancer ABC_E2308 Neighboring gene STARR-positive B cell enhancer ABC_E8949 Neighboring gene coiled-coil domain containing 12 Neighboring gene predicted gene, 35715

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables coreceptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables death receptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables nerve growth factor binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables neurotrophin p75 receptor binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in Rho protein signal transduction IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in apoptotic process IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in signal transduction IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in cell body membrane ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in cell surface IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in lamellipodium IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in neuron projection membrane ISO
    Inferred from Sequence Orthology
    more info
     
    located_in nuclear envelope lumen IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    PubMed 
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    death domain-containing membrane protein NRADD
    Names
    neurotrophin receptor homolog-2
    neurotrophin receptor-alike death domain protein

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_026012.2NP_080288.1  death domain-containing membrane protein NRADD

      See identical proteins and their annotated locations for NP_080288.1

      Status: PROVISIONAL

      Source sequence(s)
      BC069856
      Consensus CDS
      CCDS23569.1
      UniProtKB/Swiss-Prot
      Q3TVC1, Q8CJ26
      UniProtKB/TrEMBL
      A0A0G2JH13
      Related
      ENSMUSP00000035069.10, ENSMUST00000035069.14
      Conserved Domains (2) summary
      cd08311
      Location:138219
      Death_p75NR; Death domain of p75 Neurotrophin Receptor
      pfam10883
      Location:5988
      DUF2681; Protein of unknown function (DUF2681)

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000075.7 Reference GRCm39 C57BL/6J

      Range
      110450203..110453461 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)