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    LINC01689 long intergenic non-protein coding RNA 1689 [ Homo sapiens (human) ]

    Gene ID: 101927869, updated on 17-Sep-2024

    Summary

    Official Symbol
    LINC01689provided by HGNC
    Official Full Name
    long intergenic non-protein coding RNA 1689provided by HGNC
    Primary source
    HGNC:HGNC:52476
    See related
    Ensembl:ENSG00000224832 AllianceGenome:HGNC:52476
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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    Genomic context

    See LINC01689 in Genome Data Viewer
    Location:
    21q21.2
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 21 NC_000021.9 (24304550..24321377, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 21 NC_060945.1 (22662701..22679529, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 21 NC_000021.8 (25676863..25693690, complement)

    Chromosome 21 - NC_000021.9Genomic Context describing neighboring genes Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr21:25184373-25185572 Neighboring gene uncharacterized LOC105372750 Neighboring gene MPRA-validated peak4384 silencer Neighboring gene vomeronasal 2 receptor 20 pseudogene Neighboring gene MPRA-validated peak4387 silencer Neighboring gene MPRA-validated peak4389 silencer Neighboring gene long intergenic non-protein coding RNA 1684 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_61838 Neighboring gene MPRA-validated peak4391 silencer Neighboring gene meiotic recombination hotspot A Neighboring gene long intergenic non-protein coding RNA 1692 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 18302 Neighboring gene uncharacterized LOC107985516

    Genomic regions, transcripts, and products

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_109963.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AP000469, BC043533
      Related
      ENST00000416218.1

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000021.9 Reference GRCh38.p14 Primary Assembly

      Range
      24304550..24321377 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060945.1 Alternate T2T-CHM13v2.0

      Range
      22662701..22679529 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)